Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm22771-201ENSMUST00000104449 91 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm11488-201ENSMUST00000117277 863 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm5757-201ENSMUST00000117494 528 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm15113-201ENSMUST00000119280 836 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm22733-201ENSMUST00000158094 91 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm9593-201ENSMUST00000166034 469 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm19203-201ENSMUST00000174049 939 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm18185-201ENSMUST00000186725 667 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm43601-201ENSMUST00000196294 945 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Mir129b-201ENSMUST00000197461 65 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm43214-201ENSMUST00000199242 352 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm5548-201ENSMUST00000055878 397 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm26439-201ENSMUST00000082592 106 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.42□□□□□ -1.7
Usp49Q6P9L4 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm26075-201ENSMUST00000104062 121 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm15313-201ENSMUST00000119179 282 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm12433-201ENSMUST00000119659 255 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm14577-201ENSMUST00000121134 256 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm23753-201ENSMUST00000157575 149 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm25999-201ENSMUST00000175398 133 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm27828-201ENSMUST00000184108 119 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm37495-201ENSMUST00000194590 264 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm42465-201ENSMUST00000197036 492 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm43841-201ENSMUST00000199491 586 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm45192-201ENSMUST00000206749 283 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm7786-201ENSMUST00000210494 436 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm45742-201ENSMUST00000212400 433 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm23460-201ENSMUST00000083258 109 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Mir323-201ENSMUST00000083683 86 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.41□□□□□ -1.7
Usp49Q6P9L4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Usp49Q6P9L4 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Usp49Q6P9L4 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.4□□□□□ -1.7
Usp49Q6P9L4 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Usp49Q6P9L4 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.4□□□□□ -1.7
Usp49Q6P9L4 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Usp49Q6P9L4 Gm25169-201ENSMUST00000104190 129 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm14607-201ENSMUST00000119119 491 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm11403-201ENSMUST00000122195 369 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm11834-201ENSMUST00000122257 585 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm14903-201ENSMUST00000122435 537 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm26476-201ENSMUST00000122618 313 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm6058-201ENSMUST00000154261 399 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm16303-201ENSMUST00000161498 390 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Usp49Q6P9L4 Gm5527-201ENSMUST00000179821 642 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms