Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm16327-201ENSMUST00000137146 228 ntBASIC2.28□□□□□ -2.05
Col7a1Q63870 Gm20074-201ENSMUST00000208144 484 ntBASIC2.28□□□□□ -2.05
Col7a1Q63870 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.28□□□□□ -2.05
Col7a1Q63870 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.28□□□□□ -2.05
Col7a1Q63870 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Col7a1Q63870 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.05
Col7a1Q63870 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.05
Col7a1Q63870 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Col7a1Q63870 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm12387-201ENSMUST00000118573 955 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm12871-201ENSMUST00000118758 438 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm16017-201ENSMUST00000119834 208 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm28637-201ENSMUST00000179424 345 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col7a1Q63870 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col7a1Q63870 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col7a1Q63870 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm37625-201ENSMUST00000194969 4872 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Col7a1Q63870 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Col7a1Q63870 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col7a1Q63870 Ang-ps3-201ENSMUST00000177964 433 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm28263-201ENSMUST00000185884 400 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm17929-201ENSMUST00000186851 627 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm45296-201ENSMUST00000209625 205 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.27□□□□□ -2.05
Col7a1Q63870 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Mir499-201ENSMUST00000102357 79 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm24949-201ENSMUST00000183609 215 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm45654-201ENSMUST00000210980 123 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm17890-201ENSMUST00000221419 757 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm10242-201ENSMUST00000090064 330 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col7a1Q63870 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col7a1Q63870 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col7a1Q63870 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC2.26□□□□□ -2.05
Col7a1Q63870 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col7a1Q63870 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm24671-201ENSMUST00000104159 158 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm43587-201ENSMUST00000199590 204 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm6649-201ENSMUST00000199743 1165 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm7214-201ENSMUST00000222428 272 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Gm19154-201ENSMUST00000223330 940 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Snora33-201ENSMUST00000093556 129 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col7a1Q63870 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC2.26□□□□□ -2.05
Col7a1Q63870 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col7a1Q63870 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col7a1Q63870 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm43901-201ENSMUST00000203247 453 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm19366-201ENSMUST00000206996 156 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm45879-201ENSMUST00000212521 392 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm12941-201ENSMUST00000117934 220 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm14578-201ENSMUST00000122166 391 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm24840-201ENSMUST00000122603 147 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm17183-201ENSMUST00000171170 493 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col7a1Q63870 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col7a1Q63870 Mir497-201ENSMUST00000200557 84 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm45312-201ENSMUST00000210566 311 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm38010-201ENSMUST00000192592 2784 ntBASIC2.25□□□□□ -2.05
Col7a1Q63870 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
Col7a1Q63870 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col7a1Q63870 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Col7a1Q63870 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Col7a1Q63870 Gm14912-201ENSMUST00000120166 1773 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms