Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm29600-201ENSMUST00000188687 377 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm5252-201ENSMUST00000189030 909 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm29573-201ENSMUST00000190291 919 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm37946-201ENSMUST00000192064 347 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm36259-201ENSMUST00000197340 392 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm43810-201ENSMUST00000201018 232 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm8745-201ENSMUST00000207846 782 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm29817-201ENSMUST00000210098 172 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CtcfQ61164 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CtcfQ61164 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CtcfQ61164 Mir323-201ENSMUST00000083683 86 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CtcfQ61164 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.31□□□□□ -1.72
CtcfQ61164 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CtcfQ61164 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CtcfQ61164 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm12568-201ENSMUST00000117362 624 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm12044-201ENSMUST00000120335 213 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm12103-201ENSMUST00000121892 362 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CtcfQ61164 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CtcfQ61164 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm25979-201ENSMUST00000157177 138 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm2855-201ENSMUST00000166765 456 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm20773-201ENSMUST00000178940 681 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Mir6960-201ENSMUST00000183449 61 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm28489-201ENSMUST00000186655 316 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.31□□□□□ -1.72
CtcfQ61164 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.31□□□□□ -1.72
CtcfQ61164 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm43855-201ENSMUST00000197462 507 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm43384-201ENSMUST00000200569 637 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm17893-201ENSMUST00000203017 770 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm43897-201ENSMUST00000204019 309 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm44909-201ENSMUST00000208756 165 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm18414-201ENSMUST00000210858 694 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.31□□□□□ -1.72
CtcfQ61164 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms