Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim38Q5SZ99 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.82□□□□□ -1.8
Trim38Q5SZ99 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.82□□□□□ -1.8
Trim38Q5SZ99 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm24125-201ENSMUST00000104105 137 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm11372-201ENSMUST00000117348 570 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm13678-201ENSMUST00000118926 340 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm14570-201ENSMUST00000119444 391 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm9001-201ENSMUST00000121642 399 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm15147-201ENSMUST00000122263 483 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm13194-201ENSMUST00000142299 311 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm5963-201ENSMUST00000143451 236 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm23098-201ENSMUST00000157552 299 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm22531-201ENSMUST00000158819 140 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm10357-201ENSMUST00000159886 264 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm16290-201ENSMUST00000161175 474 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm26219-201ENSMUST00000175216 71 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm37828-201ENSMUST00000192496 432 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm43096-201ENSMUST00000196173 421 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Gm43228-201ENSMUST00000200735 264 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Snord15a-201ENSMUST00000083888 148 ntBASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim38Q5SZ99 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm13087-201ENSMUST00000118298 256 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm14627-201ENSMUST00000118931 567 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm14103-201ENSMUST00000119075 366 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm11830-201ENSMUST00000120175 561 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm11252-201ENSMUST00000120572 939 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm13973-201ENSMUST00000121371 894 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm25026-201ENSMUST00000175017 188 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Mir713-201ENSMUST00000178651 108 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm27445-201ENSMUST00000184484 72 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Mir6715-201ENSMUST00000184990 57 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Mir6943-201ENSMUST00000185186 66 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm44392-201ENSMUST00000196758 115 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm8209-201ENSMUST00000206386 553 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm18268-201ENSMUST00000208445 943 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Mir27a-201ENSMUST00000083510 87 ntBASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Trim38Q5SZ99 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Mir294-201ENSMUST00000104710 84 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm15125-201ENSMUST00000116185 800 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm11367-201ENSMUST00000117802 120 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm14731-201ENSMUST00000119216 376 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm12739-201ENSMUST00000119769 382 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm25883-201ENSMUST00000157781 271 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm23257-201ENSMUST00000158322 132 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm25369-201ENSMUST00000158848 132 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm36934-201ENSMUST00000192007 306 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms