Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 AC239878.1-201ENSMUST00000224212 506 ntBASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 AC116395.1-201ENSMUST00000225480 1143 ntBASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Gm25205-201ENSMUST00000082841 103 ntBASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Gm25481-201ENSMUST00000083221 158 ntBASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 n-R5s54-201ENSMUST00000083837 112 ntBASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav3-1Q5R1I8 Gm16436-201ENSMUST00000121510 1607 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm26144-201ENSMUST00000104475 132 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm15151-201ENSMUST00000117106 177 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm14751-201ENSMUST00000117693 222 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm14627-201ENSMUST00000118931 567 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm14791-201ENSMUST00000119061 1166 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm14843-201ENSMUST00000119596 212 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm9225-201ENSMUST00000121921 836 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm22330-201ENSMUST00000158068 115 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm23223-201ENSMUST00000158119 127 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm25902-201ENSMUST00000158493 318 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm24876-201ENSMUST00000158780 92 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Mir5099-201ENSMUST00000175257 74 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm17929-201ENSMUST00000186851 627 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm29045-201ENSMUST00000187278 698 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm6137-201ENSMUST00000187552 578 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm28060-201ENSMUST00000191554 189 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Ighv3-7-201ENSMUST00000193370 348 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm6059-201ENSMUST00000196903 340 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm19089-201ENSMUST00000197207 613 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm42785-201ENSMUST00000202316 3835 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm45327-201ENSMUST00000211612 565 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm19540-201ENSMUST00000221843 810 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm19786-201ENSMUST00000222589 580 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Mecom-201ENSMUST00000061088 348 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Mir17-201ENSMUST00000083574 84 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.92□□□□□ -2.1
Trav3-1Q5R1I8 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm24578-201ENSMUST00000103970 129 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm13761-201ENSMUST00000117238 807 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Mir1900-201ENSMUST00000122714 78 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm27903-201ENSMUST00000175482 126 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm24757-201ENSMUST00000176987 371 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm20674-201ENSMUST00000177452 369 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Mir7676-1-201ENSMUST00000183491 62 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Mir7676-2-201ENSMUST00000183523 62 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm27538-201ENSMUST00000185065 294 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm17981-201ENSMUST00000191109 739 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm37343-201ENSMUST00000192542 111 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Mir7217-201ENSMUST00000200304 62 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 AC152979.1-201ENSMUST00000218214 289 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 AC117588.3-201ENSMUST00000228517 325 ntBASIC1.91□□□□□ -2.1
Trav3-1Q5R1I8 AC074315.1-201ENSMUST00000228801 214 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms