Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm26866-201ENSMUST00000180414 802 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Mir142-201ENSMUST00000198092 64 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Gm45034-201ENSMUST00000206831 482 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Gm8423-201ENSMUST00000211387 607 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim58Q5NCC9 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Trim58Q5NCC9 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.96□□□□□ -1.77
Trim58Q5NCC9 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Trim58Q5NCC9 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm24119-201ENSMUST00000103979 246 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm11876-201ENSMUST00000120002 269 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm12276-201ENSMUST00000121709 301 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm13676-201ENSMUST00000122185 591 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm23326-201ENSMUST00000157419 105 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm37989-201ENSMUST00000195202 803 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm43841-201ENSMUST00000199491 586 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm43992-201ENSMUST00000204358 197 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm44824-201ENSMUST00000207021 229 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm9373-201ENSMUST00000208724 599 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm23460-201ENSMUST00000083258 109 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.96□□□□□ -1.78
Trim58Q5NCC9 Gm37407-201ENSMUST00000194793 1316 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm7853-201ENSMUST00000100708 478 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm14825-201ENSMUST00000113538 701 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm14987-201ENSMUST00000117820 676 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm12902-201ENSMUST00000118389 322 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm3835-201ENSMUST00000120752 403 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm13508-201ENSMUST00000121639 775 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm16129-201ENSMUST00000152628 486 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm25606-201ENSMUST00000158363 95 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Mir703-201ENSMUST00000197105 109 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm8106-201ENSMUST00000213123 523 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm19786-201ENSMUST00000222589 580 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.95□□□□□ -1.78
Trim58Q5NCC9 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm24273-201ENSMUST00000102332 164 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm14739-201ENSMUST00000120424 802 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm23387-201ENSMUST00000158586 107 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm16569-201ENSMUST00000160526 314 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm28591-201ENSMUST00000185259 183 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm29602-201ENSMUST00000186887 442 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm28191-201ENSMUST00000189112 211 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm44088-201ENSMUST00000204595 237 ntBASIC3.94□□□□□ -1.78
Trim58Q5NCC9 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms