Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm21916-201ENSMUST00000178771 498 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21801-201ENSMUST00000178865 498 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21633-201ENSMUST00000178941 498 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21893-201ENSMUST00000179119 397 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm17412-201ENSMUST00000179261 468 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21821-201ENSMUST00000179646 498 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21588-201ENSMUST00000180074 498 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21780-201ENSMUST00000180128 498 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21572-201ENSMUST00000180134 498 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21529-201ENSMUST00000180175 498 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm26866-201ENSMUST00000180414 802 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm27952-201ENSMUST00000184748 105 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm4854-201ENSMUST00000185902 574 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm29370-202ENSMUST00000187476 499 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm17967-201ENSMUST00000195319 647 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm36247-201ENSMUST00000211834 285 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm24147-201ENSMUST00000082763 144 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Usp28Q5I043 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.46□□□□□ -1.86
Usp28Q5I043 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Usp28Q5I043 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm11446-201ENSMUST00000121319 866 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm9775-201ENSMUST00000189402 331 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm18507-201ENSMUST00000218855 525 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Usp28Q5I043 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Usp28Q5I043 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm23738-201ENSMUST00000082828 171 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Usp28Q5I043 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Usp28Q5I043 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.45□□□□□ -1.86
Usp28Q5I043 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.44□□□□□ -1.86
Usp28Q5I043 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Usp28Q5I043 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm24118-201ENSMUST00000103972 126 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm25272-201ENSMUST00000104293 128 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Usp28Q5I043 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm12294-201ENSMUST00000119723 490 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.44□□□□□ -1.86
Usp28Q5I043 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm24417-201ENSMUST00000178123 79 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm24653-201ENSMUST00000178541 79 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm25934-201ENSMUST00000178642 79 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm27783-201ENSMUST00000183534 105 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm28591-201ENSMUST00000185259 183 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm7142-201ENSMUST00000194232 586 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm44300-201ENSMUST00000196792 121 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm45367-201ENSMUST00000210171 347 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.44□□□□□ -1.86
Usp28Q5I043 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.44□□□□□ -1.86
Usp28Q5I043 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Usp28Q5I043 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Mir499-201ENSMUST00000102357 79 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm16383-201ENSMUST00000118122 232 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm13228-201ENSMUST00000118937 634 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm14739-201ENSMUST00000120424 802 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm11344-201ENSMUST00000122011 335 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms