Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm24273-201ENSMUST00000102332 164 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm13228-201ENSMUST00000118937 634 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm14517-201ENSMUST00000119040 337 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm13603-201ENSMUST00000119404 83 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm15157-201ENSMUST00000121852 702 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm22985-201ENSMUST00000122754 116 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm24850-201ENSMUST00000158029 119 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Mir8118-201ENSMUST00000183962 129 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm19131-201ENSMUST00000203408 789 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm45162-201ENSMUST00000209013 618 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm23448-201ENSMUST00000083151 104 ntBASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim40Q3UWA4 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Mir761-201ENSMUST00000103245 76 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm23133-201ENSMUST00000104255 135 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm26474-201ENSMUST00000116762 122 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm23178-201ENSMUST00000116782 95 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm12568-201ENSMUST00000117362 624 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm12994-201ENSMUST00000119601 447 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm9440-201ENSMUST00000119667 539 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm14687-201ENSMUST00000120206 363 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm15111-201ENSMUST00000122142 878 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm23111-201ENSMUST00000122652 105 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm23554-201ENSMUST00000157818 110 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm24537-201ENSMUST00000157950 102 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm3221-201ENSMUST00000164869 440 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm17154-201ENSMUST00000165748 431 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm20542-201ENSMUST00000174582 372 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Mir5134-201ENSMUST00000175529 78 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm25019-201ENSMUST00000179732 110 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm3454-201ENSMUST00000185571 412 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm18727-201ENSMUST00000185981 553 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm20162-201ENSMUST00000193629 871 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm18748-201ENSMUST00000198507 622 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm8820-201ENSMUST00000204077 571 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm3189-201ENSMUST00000205595 832 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm5471-201ENSMUST00000072732 337 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm26439-201ENSMUST00000082592 106 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Olfr203-201ENSMUST00000089305 924 ntBASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim40Q3UWA4 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim40Q3UWA4 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.41□□□□□ -1.86
Trim40Q3UWA4 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trim40Q3UWA4 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms