Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm15026-201ENSMUST00000119219 458 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm14989-201ENSMUST00000120497 207 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm14600-201ENSMUST00000121032 630 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm23671-201ENSMUST00000157472 103 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm23540-201ENSMUST00000157543 164 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm16236-201ENSMUST00000159588 379 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm16147-201ENSMUST00000162143 373 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm25944-201ENSMUST00000178758 94 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm28148-201ENSMUST00000186924 697 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm37097-201ENSMUST00000193676 336 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm37533-201ENSMUST00000193848 545 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm25480-201ENSMUST00000083217 133 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm25272-201ENSMUST00000104293 128 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm13314-201ENSMUST00000118742 335 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm14905-201ENSMUST00000122351 639 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm2892-201ENSMUST00000145537 711 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm22186-201ENSMUST00000157822 122 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm25557-201ENSMUST00000158084 315 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm6900-201ENSMUST00000178971 342 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm29105-201ENSMUST00000187256 450 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm29460-201ENSMUST00000188607 714 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm7299-201ENSMUST00000194441 581 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 LOC667541-201ENSMUST00000223408 278 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm9309-201ENSMUST00000223537 546 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trafd1Q3UDK1 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Trafd1Q3UDK1 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Trafd1Q3UDK1 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.4□□□□□ -1.86
Trafd1Q3UDK1 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.4□□□□□ -1.86
Trafd1Q3UDK1 Gm14931-201ENSMUST00000111079 253 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm12691-201ENSMUST00000120186 456 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm14927-201ENSMUST00000120283 454 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm13692-201ENSMUST00000120774 371 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm13194-201ENSMUST00000142299 311 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm22310-201ENSMUST00000157509 116 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm24875-201ENSMUST00000158888 104 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms