Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Brf2Q3UAW9 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Brf2Q3UAW9 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm24318-201ENSMUST00000104490 131 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm14628-201ENSMUST00000117508 635 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm15037-201ENSMUST00000120358 259 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm22561-201ENSMUST00000157331 84 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm25334-201ENSMUST00000158036 110 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm26271-201ENSMUST00000158349 104 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm16588-201ENSMUST00000162889 355 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm23648-201ENSMUST00000180301 107 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm21070-201ENSMUST00000182425 985 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm27286-201ENSMUST00000184934 179 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm18448-201ENSMUST00000186286 599 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm28924-201ENSMUST00000190012 241 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm29516-201ENSMUST00000190402 468 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm38270-201ENSMUST00000192721 407 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm4644-201ENSMUST00000197587 400 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm18100-201ENSMUST00000200897 452 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm44720-201ENSMUST00000206076 260 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm5175-202ENSMUST00000219699 529 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm2446-201ENSMUST00000220144 772 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm18388-201ENSMUST00000222339 557 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm23506-201ENSMUST00000083077 107 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm26128-201ENSMUST00000083170 110 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Mir34b-201ENSMUST00000083558 84 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm25008-201ENSMUST00000083809 81 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm8074-201ENSMUST00000095071 252 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Brf2Q3UAW9 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm24469-201ENSMUST00000104487 131 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Mir190b-201ENSMUST00000104803 80 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm14890-201ENSMUST00000117660 676 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm15994-201ENSMUST00000118029 402 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm6182-201ENSMUST00000156439 1208 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm25913-201ENSMUST00000157617 135 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm3102-201ENSMUST00000164236 489 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm27875-201ENSMUST00000184425 123 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm18692-201ENSMUST00000193047 511 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm43541-201ENSMUST00000197208 581 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm19726-201ENSMUST00000205008 240 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm45032-201ENSMUST00000205375 520 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm12582-201ENSMUST00000030555 697 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Brf2Q3UAW9 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.77□□□□□ -1.81
Brf2Q3UAW9 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.77□□□□□ -1.81
Brf2Q3UAW9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Brf2Q3UAW9 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.77□□□□□ -1.81
Brf2Q3UAW9 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Brf2Q3UAW9 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.77□□□□□ -1.81
Brf2Q3UAW9 Gm25537-201ENSMUST00000103851 109 ntBASIC3.77□□□□□ -1.81
Brf2Q3UAW9 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Brf2Q3UAW9 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.77□□□□□ -1.81
Brf2Q3UAW9 Gm23178-201ENSMUST00000116782 95 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms