Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm23510-201ENSMUST00000083083 163 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm13321-201ENSMUST00000117101 400 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm11488-201ENSMUST00000117277 863 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm11432-201ENSMUST00000117334 231 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm14293-201ENSMUST00000118528 577 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm15113-201ENSMUST00000119280 836 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm22531-201ENSMUST00000158819 140 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Mir7676-1-201ENSMUST00000183491 62 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Mir7676-2-201ENSMUST00000183523 62 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Mir6401-201ENSMUST00000184499 109 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm28414-201ENSMUST00000190111 294 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm43884-201ENSMUST00000204251 559 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 CT025526.1-201ENSMUST00000217327 267 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm37211-201ENSMUST00000193392 3433 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 AC124572.2-201ENSMUST00000218041 5152 ntBASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.19□□□□□ -1.58
Ddb1Q3U1J4 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm25213-201ENSMUST00000102388 113 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm22590-201ENSMUST00000104247 128 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm25376-201ENSMUST00000104340 133 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm14591-201ENSMUST00000120407 518 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm14413-201ENSMUST00000122158 408 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm6568-201ENSMUST00000122274 697 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm24008-201ENSMUST00000157733 138 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm24438-201ENSMUST00000157893 115 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm25873-201ENSMUST00000180317 107 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm27249-201ENSMUST00000185049 328 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm29610-201ENSMUST00000187749 453 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm29545-201ENSMUST00000188878 694 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm29389-201ENSMUST00000191562 352 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Gm17887-201ENSMUST00000200194 547 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddb1Q3U1J4 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm15951-201ENSMUST00000118377 400 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm12900-201ENSMUST00000120919 573 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm25520-201ENSMUST00000158389 118 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms