Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm27025-201ENSMUST00000182392 942 ntBASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Gm29452-201ENSMUST00000187996 313 ntBASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Gm28860-201ENSMUST00000188103 313 ntBASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Gm43899-201ENSMUST00000203675 246 ntBASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Gm44824-201ENSMUST00000207021 229 ntBASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.39□□□□□ -1.87
Trim43aQ3TL54 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Gm7204-201ENSMUST00000062591 600 ntBASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim43aQ3TL54 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm23530-201ENSMUST00000104564 137 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm13717-201ENSMUST00000119868 365 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm12880-201ENSMUST00000120652 494 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm5392-201ENSMUST00000122189 789 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm24213-201ENSMUST00000158255 258 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Mir3106-201ENSMUST00000175401 82 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm28314-201ENSMUST00000191276 345 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm28060-201ENSMUST00000191554 189 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm29815-201ENSMUST00000202418 178 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm44487-201ENSMUST00000205145 325 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm45474-201ENSMUST00000209471 408 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.38□□□□□ -1.87
Trim43aQ3TL54 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.38□□□□□ -1.87
Trim43aQ3TL54 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm14971-201ENSMUST00000117980 663 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm12902-201ENSMUST00000118389 322 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm12954-201ENSMUST00000118610 611 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm11843-201ENSMUST00000118984 425 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm22956-201ENSMUST00000122520 80 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm23791-201ENSMUST00000122553 293 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm23168-201ENSMUST00000157156 143 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm23667-201ENSMUST00000157466 120 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm27163-201ENSMUST00000184767 409 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Trbv27-201ENSMUST00000193711 277 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm7299-201ENSMUST00000194441 581 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm43308-201ENSMUST00000197236 373 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm44076-201ENSMUST00000203072 520 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.37□□□□□ -1.87
Trim43aQ3TL54 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm14786-201ENSMUST00000117127 944 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm15074-201ENSMUST00000117603 936 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm22026-201ENSMUST00000122735 281 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Mir8096-201ENSMUST00000184526 127 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm28923-201ENSMUST00000187755 322 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm43115-201ENSMUST00000196244 160 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm32381-201ENSMUST00000203192 476 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm44118-201ENSMUST00000204665 229 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm45380-201ENSMUST00000210465 315 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm23738-201ENSMUST00000082828 171 ntBASIC3.36□□□□□ -1.87
Trim43aQ3TL54 Gm26064-201ENSMUST00000083381 109 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms