Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Cux1P53564 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cux1P53564 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cux1P53564 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.21□□□□□ -1.73
Cux1P53564 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cux1P53564 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cux1P53564 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cux1P53564 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cux1P53564 Gm37807-201ENSMUST00000194310 190 ntBASIC4.21□□□□□ -1.73
Cux1P53564 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.21□□□□□ -1.73
Cux1P53564 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC4.21□□□□□ -1.73
Cux1P53564 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Cux1P53564 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Cux1P53564 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cux1P53564 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cux1P53564 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cux1P53564 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.21□□□□□ -1.74
Cux1P53564 Gm24876-201ENSMUST00000158780 92 ntBASIC4.21□□□□□ -1.74
Cux1P53564 Gm9890-201ENSMUST00000171867 537 ntBASIC4.21□□□□□ -1.74
Cux1P53564 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cux1P53564 Gm28500-201ENSMUST00000190286 151 ntBASIC4.21□□□□□ -1.74
Cux1P53564 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC4.21□□□□□ -1.74
Cux1P53564 Gm37664-201ENSMUST00000194607 3813 ntBASIC4.2□□□□□ -1.74
Cux1P53564 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.2□□□□□ -1.74
Cux1P53564 Gm21999-201ENSMUST00000165985 387 ntBASIC4.2□□□□□ -1.74
Cux1P53564 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cux1P53564 Gm45474-201ENSMUST00000209471 408 ntBASIC4.2□□□□□ -1.74
Cux1P53564 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.2□□□□□ -1.74
Cux1P53564 Gm7117-201ENSMUST00000071515 387 ntBASIC4.2□□□□□ -1.74
Cux1P53564 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cux1P53564 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.2□□□□□ -1.74
Cux1P53564 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cux1P53564 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.19□□□□□ -1.74
Cux1P53564 Gm14448-201ENSMUST00000116383 210 ntBASIC4.19□□□□□ -1.74
Cux1P53564 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cux1P53564 Gm16318-201ENSMUST00000162402 601 ntBASIC4.19□□□□□ -1.74
Cux1P53564 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cux1P53564 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.19□□□□□ -1.74
Cux1P53564 Gm26585-201ENSMUST00000180890 630 ntBASIC4.19□□□□□ -1.74
Cux1P53564 Gm6321-201ENSMUST00000194460 1090 ntBASIC4.19□□□□□ -1.74
Cux1P53564 Gm26379-202ENSMUST00000200225 132 ntBASIC4.19□□□□□ -1.74
Cux1P53564 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cux1P53564 Gm7540-201ENSMUST00000219764 926 ntBASIC4.19□□□□□ -1.74
Cux1P53564 AC144628.1-201ENSMUST00000227943 466 ntBASIC4.19□□□□□ -1.74
Cux1P53564 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cux1P53564 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Cux1P53564 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Cux1P53564 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cux1P53564 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.18□□□□□ -1.74
Cux1P53564 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.18□□□□□ -1.74
Cux1P53564 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.18□□□□□ -1.74
Cux1P53564 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.18□□□□□ -1.74
Cux1P53564 Gm26458-201ENSMUST00000082832 128 ntBASIC4.18□□□□□ -1.74
Cux1P53564 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Cux1P53564 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cux1P53564 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cux1P53564 Gm14821-201ENSMUST00000121975 435 ntBASIC4.17□□□□□ -1.74
Cux1P53564 Gm29335-201ENSMUST00000188361 459 ntBASIC4.17□□□□□ -1.74
Cux1P53564 Gm20946-201ENSMUST00000212367 461 ntBASIC4.17□□□□□ -1.74
Cux1P53564 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cux1P53564 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.17□□□□□ -1.74
Cux1P53564 Gm42445-201ENSMUST00000196996 2893 ntBASIC4.17□□□□□ -1.74
Cux1P53564 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.17□□□□□ -1.74
Cux1P53564 Gm43268-201ENSMUST00000201536 4055 ntBASIC4.17□□□□□ -1.74
Cux1P53564 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cux1P53564 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cux1P53564 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Cux1P53564 Gm12598-201ENSMUST00000117333 830 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm27220-201ENSMUST00000183453 262 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.16□□□□□ -1.74
Cux1P53564 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cux1P53564 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.16□□□□□ -1.74
Cux1P53564 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cux1P53564 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cux1P53564 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Cux1P53564 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cux1P53564 Gm8569-201ENSMUST00000117630 647 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm24082-201ENSMUST00000175175 83 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cux1P53564 Gm26983-201ENSMUST00000182051 388 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Mir7009-201ENSMUST00000184519 64 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm27369-201ENSMUST00000185182 71 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm29038-201ENSMUST00000191543 678 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm44208-201ENSMUST00000205199 421 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm45879-201ENSMUST00000212521 392 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Gm46996-201ENSMUST00000220924 408 ntBASIC4.16□□□□□ -1.74
Cux1P53564 AC139845.2-201ENSMUST00000227504 436 ntBASIC4.16□□□□□ -1.74
Cux1P53564 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cux1P53564 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cux1P53564 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cux1P53564 Gm14897-201ENSMUST00000118213 207 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Gm11866-201ENSMUST00000120209 335 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Gm28781-201ENSMUST00000185760 696 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Gm29574-201ENSMUST00000186226 696 ntBASIC4.15□□□□□ -1.75
Cux1P53564 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cux1P53564 Gm29307-201ENSMUST00000187367 696 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Gm29339-201ENSMUST00000189613 696 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms