Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm23743-201ENSMUST00000157389 274 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm24847-201ENSMUST00000158032 108 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm22085-201ENSMUST00000158344 110 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm17119-201ENSMUST00000163943 280 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm23793-201ENSMUST00000179396 117 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx1P48377 Gm28008-201ENSMUST00000184021 186 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm37421-201ENSMUST00000193088 132 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm37732-201ENSMUST00000194377 316 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm37167-201ENSMUST00000194946 396 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm43115-201ENSMUST00000196244 160 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Gm46194-201ENSMUST00000218136 320 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx1P48377 Gm26263-201ENSMUST00000083281 164 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx1P48377 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.8□□□□□ -1.48
Rfx1P48377 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx1P48377 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx1P48377 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rfx1P48377 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm23910-201ENSMUST00000104597 132 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm8121-201ENSMUST00000153583 499 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.79□□□□□ -1.48
Rfx1P48377 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Rfx1P48377 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx1P48377 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx1P48377 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm18924-201ENSMUST00000211929 316 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Gm18016-201ENSMUST00000216119 801 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.79□□□□□ -1.48
Rfx1P48377 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm24166-201ENSMUST00000082724 135 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Gm6177-201ENSMUST00000085589 465 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.79□□□□□ -1.48
Rfx1P48377 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx1P48377 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Rfx1P48377 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Rfx1P48377 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l9-201ENSMUST00000101891 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm26504-201ENSMUST00000102033 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Gm11912-201ENSMUST00000117235 264 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm12149-201ENSMUST00000117511 654 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm12379-201ENSMUST00000119607 391 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm12237-201ENSMUST00000120158 470 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm13511-201ENSMUST00000121167 363 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22791-201ENSMUST00000157232 145 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm23068-201ENSMUST00000158239 293 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm16569-201ENSMUST00000160526 314 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.78□□□□□ -1.48
Rfx1P48377 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22258-201ENSMUST00000177645 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm26502-201ENSMUST00000177732 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l13-201ENSMUST00000177737 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm25350-201ENSMUST00000177849 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l15-201ENSMUST00000177940 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm23446-201ENSMUST00000177977 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l4-201ENSMUST00000177982 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm26201-201ENSMUST00000178047 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm24711-201ENSMUST00000178062 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm24609-201ENSMUST00000178166 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm23265-201ENSMUST00000178321 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22812-201ENSMUST00000178329 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l3-201ENSMUST00000178370 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm26246-201ENSMUST00000178388 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22131-201ENSMUST00000178415 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm25155-201ENSMUST00000178450 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm24760-201ENSMUST00000178530 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm26032-201ENSMUST00000178535 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22285-201ENSMUST00000178576 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22417-201ENSMUST00000178656 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l2-201ENSMUST00000178675 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm26270-201ENSMUST00000178690 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l16-201ENSMUST00000178777 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm25210-201ENSMUST00000178813 94 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms