Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm25272-201ENSMUST00000104293 128 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Traf1P39428 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm13228-201ENSMUST00000118937 634 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm14517-201ENSMUST00000119040 337 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm13273-201ENSMUST00000119737 159 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm6591-201ENSMUST00000121063 434 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm8244-201ENSMUST00000121254 264 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.28□□□□□ -1.72
Traf1P39428 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.28□□□□□ -1.72
Traf1P39428 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC4.28□□□□□ -1.72
Traf1P39428 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Traf1P39428 Gm22310-201ENSMUST00000157509 116 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Traf1P39428 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Traf1P39428 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Traf1P39428 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Traf1P39428 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Traf1P39428 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Traf1P39428 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.28□□□□□ -1.72
Traf1P39428 Gm37698-201ENSMUST00000192605 463 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm44294-201ENSMUST00000205090 728 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm18268-201ENSMUST00000208445 943 ntBASIC4.28□□□□□ -1.72
Traf1P39428 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Traf1P39428 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Gm18116-201ENSMUST00000220920 537 ntBASIC4.28□□□□□ -1.72
Traf1P39428 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Traf1P39428 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Traf1P39428 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.28□□□□□ -1.72
Traf1P39428 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Traf1P39428 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Traf1P39428 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Traf1P39428 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Traf1P39428 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Traf1P39428 Gm24273-201ENSMUST00000102332 164 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Traf1P39428 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm5943-201ENSMUST00000119458 459 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm16017-201ENSMUST00000119834 208 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm22320-201ENSMUST00000157149 312 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm24244-201ENSMUST00000157317 130 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm25667-201ENSMUST00000157701 275 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Traf1P39428 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.27□□□□□ -1.73
Traf1P39428 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Traf1P39428 Gm27942-201ENSMUST00000184669 101 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Traf1P39428 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Traf1P39428 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Traf1P39428 Gm20811-201ENSMUST00000190500 553 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Traf1P39428 Gm6064-201ENSMUST00000203999 454 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm8209-201ENSMUST00000206386 553 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Traf1P39428 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm19219-201ENSMUST00000215863 724 ntBASIC4.27□□□□□ -1.73
Traf1P39428 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.27□□□□□ -1.73
Traf1P39428 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Traf1P39428 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Traf1P39428 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Traf1P39428 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Traf1P39428 Gm10212-201ENSMUST00000087884 324 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.27□□□□□ -1.73
Traf1P39428 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Traf1P39428 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Traf1P39428 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Traf1P39428 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Traf1P39428 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm24951-201ENSMUST00000102182 109 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm23697-201ENSMUST00000103897 110 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm15103-201ENSMUST00000119893 871 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm12873-201ENSMUST00000119988 422 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm16005-201ENSMUST00000120515 269 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm14979-201ENSMUST00000121561 1035 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm12372-201ENSMUST00000121654 768 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm12276-201ENSMUST00000121709 301 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm22107-201ENSMUST00000122548 100 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.26□□□□□ -1.73
Traf1P39428 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.26□□□□□ -1.73
Traf1P39428 Gm22036-201ENSMUST00000157279 215 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm24553-201ENSMUST00000158653 131 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm24666-201ENSMUST00000158937 167 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm24976-201ENSMUST00000158972 135 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Mir7658-201ENSMUST00000184043 57 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Traf1P39428 Gm36934-201ENSMUST00000192007 306 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm17966-201ENSMUST00000193453 594 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm8023-201ENSMUST00000195298 903 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms