Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm23053-201ENSMUST00000175136 96 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm27896-201ENSMUST00000175162 317 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm5527-201ENSMUST00000179821 642 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.09□□□□□ -1.75
BdnfP21237 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC4.09□□□□□ -1.75
BdnfP21237 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.09□□□□□ -1.75
BdnfP21237 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC4.09□□□□□ -1.75
BdnfP21237 Gm6680-201ENSMUST00000192789 950 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.09□□□□□ -1.75
BdnfP21237 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm43171-201ENSMUST00000199882 291 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm19649-201ENSMUST00000201126 822 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.09□□□□□ -1.75
BdnfP21237 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC4.09□□□□□ -1.75
BdnfP21237 Gm44765-201ENSMUST00000206927 601 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm19137-201ENSMUST00000213790 1164 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm18116-201ENSMUST00000220920 537 ntBASIC4.09□□□□□ -1.75
BdnfP21237 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Gm25008-201ENSMUST00000083809 81 ntBASIC4.09□□□□□ -1.75
BdnfP21237 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BdnfP21237 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.09□□□□□ -1.75
BdnfP21237 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
BdnfP21237 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
BdnfP21237 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
BdnfP21237 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
BdnfP21237 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
BdnfP21237 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BdnfP21237 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
BdnfP21237 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
BdnfP21237 Gm12112-201ENSMUST00000117772 231 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm12803-201ENSMUST00000118907 821 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm14101-201ENSMUST00000121502 473 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm13220-201ENSMUST00000121535 508 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm12885-201ENSMUST00000122246 328 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm24836-201ENSMUST00000122609 108 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.08□□□□□ -1.76
BdnfP21237 Gm24241-201ENSMUST00000157787 145 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm22177-201ENSMUST00000175002 158 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm27999-201ENSMUST00000183539 193 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm27921-201ENSMUST00000183968 108 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC4.08□□□□□ -1.76
BdnfP21237 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.08□□□□□ -1.76
BdnfP21237 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm43730-201ENSMUST00000199863 372 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm35876-201ENSMUST00000205044 459 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm44208-201ENSMUST00000205199 421 ntBASIC4.08□□□□□ -1.76
BdnfP21237 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BdnfP21237 Gm18194-201ENSMUST00000210455 481 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.08□□□□□ -1.76
BdnfP21237 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.08□□□□□ -1.76
BdnfP21237 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BdnfP21237 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC4.08□□□□□ -1.76
BdnfP21237 Gm17829-201ENSMUST00000219782 344 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm6988-201ENSMUST00000222676 375 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gm7093-201ENSMUST00000223004 581 ntBASIC4.08□□□□□ -1.76
BdnfP21237 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BdnfP21237 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BdnfP21237 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BdnfP21237 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BdnfP21237 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
BdnfP21237 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
BdnfP21237 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
BdnfP21237 Gm22472-201ENSMUST00000104115 134 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm15560-201ENSMUST00000117107 643 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm14981-201ENSMUST00000117325 943 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm16128-201ENSMUST00000117855 626 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm12268-201ENSMUST00000118398 442 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm14975-201ENSMUST00000118741 664 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.07□□□□□ -1.76
BdnfP21237 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.07□□□□□ -1.76
BdnfP21237 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.07□□□□□ -1.76
BdnfP21237 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.07□□□□□ -1.76
BdnfP21237 Gm17186-201ENSMUST00000171742 456 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm27659-201ENSMUST00000183472 98 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Mir6541-201ENSMUST00000183649 110 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm27676-201ENSMUST00000183669 61 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm27161-201ENSMUST00000183960 562 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm29259-201ENSMUST00000186396 694 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm29576-201ENSMUST00000188020 678 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
BdnfP21237 Gm29330-201ENSMUST00000190032 699 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm28354-201ENSMUST00000190904 678 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm29192-201ENSMUST00000190942 377 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm28098-201ENSMUST00000191361 699 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm37599-201ENSMUST00000193067 489 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Gm37050-201ENSMUST00000193464 466 ntBASIC4.07□□□□□ -1.76
BdnfP21237 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC4.07□□□□□ -1.76
BdnfP21237 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BdnfP21237 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms