Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm22867-201ENSMUST00000157499 109 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm25720-201ENSMUST00000157503 105 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm22312-201ENSMUST00000158005 130 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.5□□□□□ -1.53
Msx1P13297 Gm27887-201ENSMUST00000184367 102 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.5□□□□□ -1.53
Msx1P13297 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.5□□□□□ -1.53
Msx1P13297 Gm29597-201ENSMUST00000188035 308 ntBASIC5.5□□□□□ -1.53
Msx1P13297 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm42453-201ENSMUST00000200477 409 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm43600-201ENSMUST00000202134 223 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm45101-201ENSMUST00000208327 232 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.5□□□□□ -1.53
Msx1P13297 AC188459.1-201ENSMUST00000216651 300 ntBASIC5.5□□□□□ -1.53
Msx1P13297 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC5.5□□□□□ -1.53
Msx1P13297 AC155712.1-201ENSMUST00000219704 160 ntBASIC5.5□□□□□ -1.53
Msx1P13297 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.5□□□□□ -1.53
Msx1P13297 AC164297.3-201ENSMUST00000224238 94 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Msx1P13297 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Msx1P13297 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm42481-201ENSMUST00000196822 2178 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Msx1P13297 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.5□□□□□ -1.53
Msx1P13297 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msx1P13297 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Msx1P13297 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msx1P13297 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Msx1P13297 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msx1P13297 Gm45557-201ENSMUST00000210004 1651 ntBASIC5.5□□□□□ -1.53
Msx1P13297 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 Gm4855-201ENSMUST00000192270 1967 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Gm37983-201ENSMUST00000193207 2006 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm26147-201ENSMUST00000104479 114 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Gm25664-201ENSMUST00000157697 107 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm22097-201ENSMUST00000157929 278 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm26362-201ENSMUST00000158865 315 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.49□□□□□ -1.53
Msx1P13297 Gm28552-201ENSMUST00000190725 388 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm43427-201ENSMUST00000198188 331 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm29736-201ENSMUST00000198189 385 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm38670-201ENSMUST00000199248 77 ntBASIC5.49□□□□□ -1.53
Msx1P13297 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Gm19256-201ENSMUST00000218550 231 ntBASIC5.49□□□□□ -1.53
Msx1P13297 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Gm6068-201ENSMUST00000222270 387 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Gm9795-201ENSMUST00000062156 693 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Msx1P13297 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.49□□□□□ -1.53
Msx1P13297 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Msx1P13297 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Msx1P13297 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.48□□□□□ -1.53
Msx1P13297 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Msx1P13297 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm15846-201ENSMUST00000116022 320 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm23990-201ENSMUST00000117031 117 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm15151-201ENSMUST00000117106 177 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm15002-201ENSMUST00000118406 452 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm22106-201ENSMUST00000122544 127 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms