Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm19726-201ENSMUST00000205008 240 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.43□□□□□ -1.54
RaraP11416 Gm18850-201ENSMUST00000211578 388 ntBASIC5.43□□□□□ -1.54
RaraP11416 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm46327-201ENSMUST00000218240 365 ntBASIC5.43□□□□□ -1.54
RaraP11416 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.43□□□□□ -1.54
RaraP11416 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.43□□□□□ -1.54
RaraP11416 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.43□□□□□ -1.54
RaraP11416 Mir338-201ENSMUST00000083666 98 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.43□□□□□ -1.54
RaraP11416 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RaraP11416 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
RaraP11416 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RaraP11416 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.43□□□□□ -1.54
RaraP11416 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RaraP11416 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RaraP11416 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RaraP11416 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RaraP11416 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.42□□□□□ -1.54
RaraP11416 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RaraP11416 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RaraP11416 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.42□□□□□ -1.54
RaraP11416 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm23941-201ENSMUST00000101953 107 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm24170-201ENSMUST00000104124 133 ntBASIC5.42□□□□□ -1.54
RaraP11416 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.42□□□□□ -1.54
RaraP11416 Gm14823-201ENSMUST00000117698 238 ntBASIC5.42□□□□□ -1.54
RaraP11416 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.42□□□□□ -1.54
RaraP11416 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm14101-201ENSMUST00000121502 473 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.42□□□□□ -1.54
RaraP11416 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.42□□□□□ -1.54
RaraP11416 Gm24818-201ENSMUST00000175093 161 ntBASIC5.42□□□□□ -1.54
RaraP11416 Mir3097-201ENSMUST00000175356 67 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21842-201ENSMUST00000177552 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21626-201ENSMUST00000177791 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21562-201ENSMUST00000177888 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21539-201ENSMUST00000177925 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21599-201ENSMUST00000178249 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21914-201ENSMUST00000178452 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21723-201ENSMUST00000178692 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21916-201ENSMUST00000178771 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm24713-201ENSMUST00000178850 107 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21801-201ENSMUST00000178865 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RaraP11416 Gm21633-201ENSMUST00000178941 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21821-201ENSMUST00000179646 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm25448-201ENSMUST00000180065 107 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21588-201ENSMUST00000180074 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21780-201ENSMUST00000180128 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21572-201ENSMUST00000180134 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm21529-201ENSMUST00000180175 498 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm28660-201ENSMUST00000186496 253 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm29370-202ENSMUST00000187476 499 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm9134-201ENSMUST00000193186 551 ntBASIC5.42□□□□□ -1.54
RaraP11416 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RaraP11416 Gm18409-202ENSMUST00000220105 529 ntBASIC5.42□□□□□ -1.54
RaraP11416 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.42□□□□□ -1.54
RaraP11416 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.42□□□□□ -1.54
RaraP11416 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RaraP11416 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RaraP11416 Gm22740-201ENSMUST00000083439 109 ntBASIC5.42□□□□□ -1.54
RaraP11416 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RaraP11416 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RaraP11416 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.42□□□□□ -1.54
RaraP11416 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RaraP11416 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RaraP11416 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
RaraP11416 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
RaraP11416 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RaraP11416 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RaraP11416 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm12285-201ENSMUST00000117347 233 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm12423-201ENSMUST00000118334 135 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm13533-201ENSMUST00000121104 177 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.41□□□□□ -1.54
RaraP11416 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm24819-201ENSMUST00000175094 166 ntBASIC5.41□□□□□ -1.54
RaraP11416 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
RaraP11416 Gm28883-201ENSMUST00000189256 369 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm28872-201ENSMUST00000191518 158 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm36954-201ENSMUST00000195362 363 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm33952-201ENSMUST00000197795 408 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.41□□□□□ -1.54
RaraP11416 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.41□□□□□ -1.54
RaraP11416 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.41□□□□□ -1.54
RaraP11416 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.41□□□□□ -1.54
RaraP11416 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm18442-201ENSMUST00000220925 639 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.41□□□□□ -1.54
RaraP11416 Gm19786-201ENSMUST00000222589 580 ntBASIC5.41□□□□□ -1.54
RaraP11416 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.41□□□□□ -1.54
RaraP11416 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RaraP11416 Gm10237-201ENSMUST00000078393 273 ntBASIC5.41□□□□□ -1.54
RaraP11416 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.41□□□□□ -1.54
RaraP11416 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.41□□□□□ -1.54
RaraP11416 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RaraP11416 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms