Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.16□□□□□ -1.74
Col3a1P08121 Gm35212-201ENSMUST00000196672 606 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 Gm42976-201ENSMUST00000200313 222 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 Gm18691-201ENSMUST00000203593 872 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 Gm44727-201ENSMUST00000204225 451 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Col3a1P08121 AC107663.3-201ENSMUST00000225873 601 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col3a1P08121 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col3a1P08121 Gm24623-201ENSMUST00000082616 194 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.16□□□□□ -1.74
Col3a1P08121 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col3a1P08121 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col3a1P08121 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col3a1P08121 Gm336-201ENSMUST00000186376 1480 ntBASIC4.15□□□□□ -1.74
Col3a1P08121 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col3a1P08121 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC4.15□□□□□ -1.74
Col3a1P08121 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Col3a1P08121 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Col3a1P08121 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.15□□□□□ -1.74
Col3a1P08121 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Col3a1P08121 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col3a1P08121 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Col3a1P08121 Gm11845-201ENSMUST00000117886 327 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC4.15□□□□□ -1.75
Col3a1P08121 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Gm25490-201ENSMUST00000158734 130 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col3a1P08121 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col3a1P08121 Gm24819-201ENSMUST00000175094 166 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Gm21894-201ENSMUST00000179631 546 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Mir7081-201ENSMUST00000184490 75 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC4.15□□□□□ -1.75
Col3a1P08121 Gm44665-201ENSMUST00000205381 251 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Gm45344-201ENSMUST00000211610 341 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Gm20946-201ENSMUST00000212367 461 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.15□□□□□ -1.75
Col3a1P08121 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col3a1P08121 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Col3a1P08121 Gm23423-201ENSMUST00000082782 106 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Col3a1P08121 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Col3a1P08121 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.15□□□□□ -1.75
Col3a1P08121 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col3a1P08121 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Col3a1P08121 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col3a1P08121 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col3a1P08121 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Col3a1P08121 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col3a1P08121 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col3a1P08121 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col3a1P08121 Gm25539-201ENSMUST00000116886 122 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm12985-201ENSMUST00000118376 183 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm15190-201ENSMUST00000120855 276 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col3a1P08121 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.14□□□□□ -1.75
Col3a1P08121 Gm26355-201ENSMUST00000158220 105 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm24773-201ENSMUST00000158513 99 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm23028-201ENSMUST00000158773 265 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Mir5127-201ENSMUST00000175295 71 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col3a1P08121 Gm21758-201ENSMUST00000179336 819 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Mir7014-201ENSMUST00000183853 63 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Mir6917-201ENSMUST00000184111 61 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm27160-201ENSMUST00000184837 199 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm28597-201ENSMUST00000187664 666 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm29639-201ENSMUST00000188375 580 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm29647-201ENSMUST00000188795 666 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Col3a1P08121 Gm28337-201ENSMUST00000190425 666 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm28504-201ENSMUST00000190977 666 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm31511-201ENSMUST00000193134 657 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm35843-201ENSMUST00000193716 666 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm37085-201ENSMUST00000193780 196 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm43198-201ENSMUST00000200927 326 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Gm43932-201ENSMUST00000204499 52 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col3a1P08121 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 AC124729.1-202ENSMUST00000225587 938 ntBASIC4.14□□□□□ -1.75
Col3a1P08121 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms