Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37866-201ENSMUST00000191950 696 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm18429-201ENSMUST00000198707 421 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm44030-201ENSMUST00000204865 432 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC2.47□□□□□ -2.01
Hmgb3O54879 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm9309-201ENSMUST00000223537 546 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 AC154562.1-201ENSMUST00000226140 966 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Hmgb3O54879 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Hmgb3O54879 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm2710-201ENSMUST00000073196 603 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Mir21a-201ENSMUST00000083521 92 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm25004-201ENSMUST00000083811 161 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Hmgb3O54879 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Hmgb3O54879 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.47□□□□□ -2.01
Hmgb3O54879 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Hmgb3O54879 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm14622-201ENSMUST00000117117 468 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm14518-201ENSMUST00000117351 542 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm14103-201ENSMUST00000119075 366 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm26254-201ENSMUST00000122491 118 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm23213-201ENSMUST00000122715 313 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm25883-201ENSMUST00000157781 271 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm37219-201ENSMUST00000192036 926 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm37616-201ENSMUST00000193974 322 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm5551-201ENSMUST00000199720 690 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm43899-201ENSMUST00000203675 246 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm45539-201ENSMUST00000210313 428 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.46□□□□□ -2.02
Hmgb3O54879 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.46□□□□□ -2.02
Hmgb3O54879 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.46□□□□□ -2.02
Hmgb3O54879 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Hmgb3O54879 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Hmgb3O54879 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Hmgb3O54879 Gm22486-201ENSMUST00000116815 137 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm16171-201ENSMUST00000118004 324 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm12042-201ENSMUST00000120479 301 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm15147-201ENSMUST00000122263 483 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm26061-201ENSMUST00000175584 108 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.45□□□□□ -2.02
Hmgb3O54879 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm43393-201ENSMUST00000200147 194 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm44208-201ENSMUST00000205199 421 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm44718-201ENSMUST00000206886 359 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm5649-201ENSMUST00000217918 951 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm7198-201ENSMUST00000219635 1074 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Hmgb3O54879 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Hmgb3O54879 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Hmgb3O54879 Olfr480-201ENSMUST00000071658 1029 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm24611-201ENSMUST00000083272 107 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm23850-201ENSMUST00000083830 169 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.45□□□□□ -2.02
Hmgb3O54879 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Hmgb3O54879 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Hmgb3O54879 Gm14647-201ENSMUST00000119392 680 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm14877-201ENSMUST00000119803 478 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm25807-201ENSMUST00000122783 305 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm25525-201ENSMUST00000177701 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm26178-201ENSMUST00000177706 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm26465-201ENSMUST00000178517 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm24317-201ENSMUST00000178536 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm25021-201ENSMUST00000179184 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm22995-201ENSMUST00000179670 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm24424-201ENSMUST00000179714 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm24389-201ENSMUST00000179962 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm25672-201ENSMUST00000180111 107 ntBASIC2.44□□□□□ -2.02
Hmgb3O54879 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.44□□□□□ -2.02
Hmgb3O54879 Gm26585-201ENSMUST00000180890 630 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms