Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Mir6960-201ENSMUST00000183449 61 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm29334-201ENSMUST00000190334 357 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Trbv22-201ENSMUST00000191697 291 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm37771-201ENSMUST00000193121 265 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Trbv11-201ENSMUST00000194354 260 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm42805-201ENSMUST00000196158 276 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm45735-201ENSMUST00000212779 319 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh9F8VPK8 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.03□□□□□ -1.77
Pcdh9F8VPK8 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm23691-201ENSMUST00000101878 107 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm11408-201ENSMUST00000117889 519 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm12543-201ENSMUST00000120410 543 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm16250-201ENSMUST00000148974 256 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm22726-201ENSMUST00000158089 179 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm22211-201ENSMUST00000158097 156 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm25605-201ENSMUST00000158364 124 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm17177-201ENSMUST00000169144 483 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Mir5112-201ENSMUST00000174897 60 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm23568-201ENSMUST00000177960 92 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm24829-201ENSMUST00000179245 92 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm5527-201ENSMUST00000179821 642 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm28615-201ENSMUST00000187527 482 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm29884-201ENSMUST00000218403 453 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 AC170810.3-201ENSMUST00000226177 374 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 AC166344.2-201ENSMUST00000226747 374 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm23460-201ENSMUST00000083258 109 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh9F8VPK8 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm11359-201ENSMUST00000120039 567 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm6587-201ENSMUST00000120219 613 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm14577-201ENSMUST00000121134 256 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm22733-201ENSMUST00000158094 91 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm25606-201ENSMUST00000158363 95 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm5263-201ENSMUST00000163646 601 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm28304-201ENSMUST00000185977 312 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm29256-201ENSMUST00000189094 312 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm28920-201ENSMUST00000189957 699 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm28484-201ENSMUST00000190606 312 ntBASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Pcdh9F8VPK8 Gm43601-201ENSMUST00000196294 945 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms