Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm25150-201ENSMUST00000157121 60 ntBASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm22076-201ENSMUST00000158601 84 ntBASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm25835-201ENSMUST00000158917 144 ntBASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm20162-201ENSMUST00000193629 871 ntBASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.37□□□□□ -1.87
Shank1D3YZU1 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.37□□□□□ -1.87
Shank1D3YZU1 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shank1D3YZU1 Gm24627-201ENSMUST00000122764 138 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm28560-201ENSMUST00000186091 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm28334-201ENSMUST00000186653 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm28148-201ENSMUST00000186924 697 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm28495-201ENSMUST00000188452 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm28232-201ENSMUST00000188683 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm28481-201ENSMUST00000189231 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm29059-201ENSMUST00000191534 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm31123-201ENSMUST00000192094 666 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm37765-201ENSMUST00000192395 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm37237-201ENSMUST00000192893 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm36968-201ENSMUST00000193737 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm38290-201ENSMUST00000195238 315 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm43142-201ENSMUST00000198670 361 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm44817-201ENSMUST00000205416 453 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC154747.1-201ENSMUST00000225265 239 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC154738.4-201ENSMUST00000228310 414 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm23424-201ENSMUST00000103889 110 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm23609-201ENSMUST00000104542 127 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm12814-201ENSMUST00000117091 846 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm12571-201ENSMUST00000118132 243 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm14906-201ENSMUST00000119265 390 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm13170-201ENSMUST00000119716 643 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm14534-201ENSMUST00000120045 357 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm23824-201ENSMUST00000158741 276 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm3470-201ENSMUST00000160819 420 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm18448-201ENSMUST00000186286 599 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm36382-201ENSMUST00000198892 541 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm18691-201ENSMUST00000203593 872 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm22154-201ENSMUST00000083844 131 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shank1D3YZU1 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.36□□□□□ -1.87
Shank1D3YZU1 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm24608-201ENSMUST00000104381 136 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm11488-201ENSMUST00000117277 863 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm15176-201ENSMUST00000117734 135 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm11943-201ENSMUST00000119473 327 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm5060-201ENSMUST00000120072 599 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm23885-201ENSMUST00000122682 294 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm11281-201ENSMUST00000141391 576 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm25519-201ENSMUST00000158392 127 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm15946-201ENSMUST00000160654 423 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm16588-201ENSMUST00000162889 355 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm26556-201ENSMUST00000180645 320 ntBASIC3.35□□□□□ -1.87
Shank1D3YZU1 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Shank1D3YZU1 Gm17966-201ENSMUST00000193453 594 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms