Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm28030-201ENSMUST00000184987 138 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm35876-201ENSMUST00000205044 459 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm45742-201ENSMUST00000212400 433 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm8681-201ENSMUST00000219115 618 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm3829-201ENSMUST00000222362 619 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm10115-201ENSMUST00000076071 1228 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm7099-201ENSMUST00000080066 554 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm44434-201ENSMUST00000203918 3745 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.43□□□□□ -2.02
Trav11A0A0B4J1J9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm23532-201ENSMUST00000104569 112 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm15560-201ENSMUST00000117107 643 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm11253-201ENSMUST00000118486 201 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm12252-201ENSMUST00000119517 219 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm13973-201ENSMUST00000121371 894 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm25047-201ENSMUST00000122667 104 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm22026-201ENSMUST00000122735 281 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm24244-201ENSMUST00000157317 130 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm25369-201ENSMUST00000158848 132 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Nron-204ENSMUST00000158971 370 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm20701-201ENSMUST00000176082 347 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm7634-201ENSMUST00000185778 553 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm36934-201ENSMUST00000192007 306 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm44099-201ENSMUST00000203299 112 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm44016-201ENSMUST00000203463 164 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm45588-201ENSMUST00000211213 630 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 AC123835.1-201ENSMUST00000214362 670 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm18892-201ENSMUST00000217628 881 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 AC158955.1-201ENSMUST00000227140 385 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 AC164883.9-201ENSMUST00000228042 399 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.42□□□□□ -2.02
Trav11A0A0B4J1J9 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Gm43883-201ENSMUST00000204002 3750 ntBASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Gm6913-201ENSMUST00000100019 348 ntBASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Gm25765-201ENSMUST00000104100 132 ntBASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.41□□□□□ -2.02
Trav11A0A0B4J1J9 Gm11252-201ENSMUST00000120572 939 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms