Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav4-2A0A075B638 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Trav4-2A0A075B638 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm12982-201ENSMUST00000117408 190 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm12427-201ENSMUST00000117719 302 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm14162-201ENSMUST00000121985 601 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm23168-201ENSMUST00000157156 143 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm24008-201ENSMUST00000157733 138 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm25605-201ENSMUST00000158364 124 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm17065-201ENSMUST00000165245 239 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Mir7242-201ENSMUST00000183710 79 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm29658-201ENSMUST00000185404 230 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm37495-201ENSMUST00000194590 264 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Gm45522-201ENSMUST00000210784 166 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 AC173345.3-201ENSMUST00000221245 1093 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 AC132336.1-201ENSMUST00000222844 1740 ntBASIC2.11□□□□□ -2.07
Trav4-2A0A075B638 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Igkv11-106-201ENSMUST00000103331 346 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm12782-201ENSMUST00000117519 727 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm6274-201ENSMUST00000118173 797 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm26411-201ENSMUST00000157668 107 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm15946-201ENSMUST00000160654 423 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Mir3090-201ENSMUST00000175597 87 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm5473-201ENSMUST00000179326 642 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Scgb2b6-201ENSMUST00000188132 330 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm45420-201ENSMUST00000211243 425 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
Trav4-2A0A075B638 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm17153-201ENSMUST00000171314 490 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm8649-201ENSMUST00000181799 233 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm29597-201ENSMUST00000188035 308 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm37807-201ENSMUST00000194310 190 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm42818-201ENSMUST00000198869 987 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm42814-201ENSMUST00000199370 460 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm44607-201ENSMUST00000205611 1090 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 AL669916.5-201ENSMUST00000214874 361 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm7034-201ENSMUST00000218638 645 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm10088-201ENSMUST00000074116 423 ntBASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav4-2A0A075B638 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.09□□□□□ -2.08
Trav4-2A0A075B638 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.09□□□□□ -2.08
Trav4-2A0A075B638 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Trav4-2A0A075B638 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Trav4-2A0A075B638 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms