Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Gm18602-201ENSMUST00000209794 851 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Gm45379-201ENSMUST00000211772 549 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Gm30674-201ENSMUST00000214523 392 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Gm8231-201ENSMUST00000221617 783 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Gm23447-201ENSMUST00000082798 163 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim3Q9R1R2 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Mir706-201ENSMUST00000102262 84 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm12881-201ENSMUST00000121191 203 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm23167-201ENSMUST00000157155 103 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm24244-201ENSMUST00000157317 130 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm24505-201ENSMUST00000157682 126 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm25555-201ENSMUST00000158078 111 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm20542-201ENSMUST00000174582 372 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm25942-201ENSMUST00000180080 110 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm24969-201ENSMUST00000180331 79 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm20574-201ENSMUST00000182867 917 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm38329-201ENSMUST00000193473 427 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm44392-201ENSMUST00000196758 115 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm18120-201ENSMUST00000220079 511 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm22245-201ENSMUST00000082479 103 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm23460-201ENSMUST00000083258 109 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.39□□□□□ -1.87
Trim3Q9R1R2 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm25317-201ENSMUST00000116824 129 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm14570-201ENSMUST00000119444 391 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm13273-201ENSMUST00000119737 159 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm14368-201ENSMUST00000145305 415 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm23540-201ENSMUST00000157543 164 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm22059-201ENSMUST00000157544 104 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm20399-201ENSMUST00000174652 132 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Snord92-201ENSMUST00000175548 85 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm20673-201ENSMUST00000177167 430 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm6113-201ENSMUST00000180319 639 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm27392-201ENSMUST00000185041 101 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm36934-201ENSMUST00000192007 306 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm37989-201ENSMUST00000195202 803 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm43214-201ENSMUST00000199242 352 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm44475-201ENSMUST00000204041 424 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm19244-201ENSMUST00000204340 253 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms