Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Prpf40aQ9R1C7 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.48
Prpf40aQ9R1C7 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.84□□□□□ -1.48
Prpf40aQ9R1C7 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Prpf40aQ9R1C7 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.84□□□□□ -1.48
Prpf40aQ9R1C7 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
Prpf40aQ9R1C7 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm14429-201ENSMUST00000121881 2024 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm12568-201ENSMUST00000117362 624 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm15073-201ENSMUST00000117432 634 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm15493-201ENSMUST00000119461 528 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm13007-201ENSMUST00000121866 365 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm8061-201ENSMUST00000122380 350 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm23211-201ENSMUST00000122717 308 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm26350-201ENSMUST00000157531 288 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm22326-201ENSMUST00000158897 351 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm17062-201ENSMUST00000166987 461 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm36934-201ENSMUST00000192007 306 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm37128-201ENSMUST00000192599 232 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm7721-201ENSMUST00000200446 546 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm7540-201ENSMUST00000219764 926 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm33654-201ENSMUST00000221704 215 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Mir331-201ENSMUST00000083673 96 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Prpf40aQ9R1C7 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm23988-201ENSMUST00000117034 122 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm13046-201ENSMUST00000117391 501 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm14890-201ENSMUST00000117660 676 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm11923-201ENSMUST00000118135 508 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm7189-201ENSMUST00000119811 429 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm12074-201ENSMUST00000120189 219 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm11677-201ENSMUST00000121349 977 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm12815-201ENSMUST00000121737 135 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm8880-201ENSMUST00000121800 454 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm12087-201ENSMUST00000121878 258 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm25624-201ENSMUST00000157222 275 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm25643-201ENSMUST00000158874 103 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Mir409-201ENSMUST00000198153 79 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm43215-201ENSMUST00000199108 252 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm38670-201ENSMUST00000199248 77 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm44825-201ENSMUST00000207557 150 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm44598-201ENSMUST00000207566 150 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm39197-201ENSMUST00000212069 457 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm45777-201ENSMUST00000213009 301 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm23721-201ENSMUST00000083005 107 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Prpf40aQ9R1C7 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms