Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm7540-201ENSMUST00000219764 926 ntBASIC4.35□□□□□ -1.71
Trim54Q9ERP3 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim54Q9ERP3 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm15176-201ENSMUST00000117734 135 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm14358-201ENSMUST00000118458 403 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm11913-201ENSMUST00000119094 336 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm6587-201ENSMUST00000120219 613 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm12543-201ENSMUST00000120410 543 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm14926-201ENSMUST00000120650 508 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm16458-201ENSMUST00000121428 502 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm22378-201ENSMUST00000157481 111 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm7241-201ENSMUST00000159853 357 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm23365-201ENSMUST00000175019 125 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm25960-201ENSMUST00000175110 125 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm44453-201ENSMUST00000175161 126 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm25195-201ENSMUST00000177656 126 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm27254-201ENSMUST00000183926 517 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm43028-201ENSMUST00000202561 481 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm44099-201ENSMUST00000203299 112 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm12582-201ENSMUST00000030555 697 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm25200-201ENSMUST00000083094 130 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Gm25126-201ENSMUST00000083343 102 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Olfr203-201ENSMUST00000089305 924 ntBASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim54Q9ERP3 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Trim54Q9ERP3 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.34□□□□□ -1.72
Trim54Q9ERP3 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.34□□□□□ -1.72
Trim54Q9ERP3 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.34□□□□□ -1.72
Trim54Q9ERP3 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm25833-201ENSMUST00000104137 133 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm22091-201ENSMUST00000116908 127 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm13478-201ENSMUST00000118312 413 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm14899-201ENSMUST00000118673 548 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm13852-201ENSMUST00000122350 242 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm23960-201ENSMUST00000157206 131 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm22390-201ENSMUST00000157588 325 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm3851-201ENSMUST00000168653 318 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Mir713-201ENSMUST00000178651 108 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm23269-201ENSMUST00000178701 107 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm20773-201ENSMUST00000178940 681 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm29550-201ENSMUST00000185543 285 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms