Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm25835-201ENSMUST00000158917 144 ntBASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Gm20773-201ENSMUST00000178940 681 ntBASIC3.11□□□□□ -1.91
Lima1Q9ERG0 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Gm9712-201ENSMUST00000210842 311 ntBASIC3.11□□□□□ -1.91
Lima1Q9ERG0 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.11□□□□□ -1.91
Lima1Q9ERG0 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.11□□□□□ -1.91
Lima1Q9ERG0 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm7853-201ENSMUST00000100708 478 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm24581-201ENSMUST00000103962 133 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm13076-201ENSMUST00000118041 204 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm11253-201ENSMUST00000118486 201 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Mir6975-201ENSMUST00000184879 61 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm28390-201ENSMUST00000185212 700 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm37193-201ENSMUST00000193087 513 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm32447-201ENSMUST00000194265 697 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm44266-201ENSMUST00000205235 500 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Snora7a-201ENSMUST00000082629 140 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Lima1Q9ERG0 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm23958-201ENSMUST00000157207 105 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm25572-201ENSMUST00000157527 172 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm25555-201ENSMUST00000158078 111 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm27025-201ENSMUST00000182392 942 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Mir6907-201ENSMUST00000183764 71 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm27796-201ENSMUST00000183863 261 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm29105-201ENSMUST00000187256 450 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm28534-201ENSMUST00000187744 676 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm43039-201ENSMUST00000202883 963 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm19244-201ENSMUST00000204340 253 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.09□□□□□ -1.91
Lima1Q9ERG0 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm24144-201ENSMUST00000082632 111 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm23738-201ENSMUST00000082828 171 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.09□□□□□ -1.91
Lima1Q9ERG0 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.09□□□□□ -1.92
Lima1Q9ERG0 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.09□□□□□ -1.92
Lima1Q9ERG0 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.09□□□□□ -1.92
Lima1Q9ERG0 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm11488-201ENSMUST00000117277 863 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm15399-201ENSMUST00000118055 724 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm28069-201ENSMUST00000189926 214 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm43308-201ENSMUST00000197236 373 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm18747-201ENSMUST00000198129 648 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm34091-201ENSMUST00000200875 604 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm31532-201ENSMUST00000203555 767 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm43899-201ENSMUST00000203675 246 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms