Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3.94□□□□□ -1.78
Cpsf1Q9EPU4 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.94□□□□□ -1.78
Cpsf1Q9EPU4 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.94□□□□□ -1.78
Cpsf1Q9EPU4 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cpsf1Q9EPU4 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm15854-201ENSMUST00000118879 808 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm20542-201ENSMUST00000174582 372 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm8649-201ENSMUST00000181799 233 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm32447-201ENSMUST00000194265 697 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm18445-201ENSMUST00000195502 774 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm44030-201ENSMUST00000204865 432 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Snora23-201ENSMUST00000082517 184 ntBASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.93□□□□□ -1.78
Cpsf1Q9EPU4 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm25500-201ENSMUST00000104426 123 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm15103-201ENSMUST00000119893 871 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm25270-201ENSMUST00000122606 138 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm24291-201ENSMUST00000157633 162 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm23385-201ENSMUST00000158592 295 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm43355-201ENSMUST00000196541 346 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm10212-201ENSMUST00000087884 324 ntBASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cpsf1Q9EPU4 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Gm13581-201ENSMUST00000120675 278 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Gm14876-201ENSMUST00000120795 327 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Gm24681-201ENSMUST00000158760 107 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Gm17091-201ENSMUST00000163248 357 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Gm27796-201ENSMUST00000183863 261 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.91□□□□□ -1.78
Cpsf1Q9EPU4 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Mir693-201ENSMUST00000102187 89 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Mir466k-201ENSMUST00000116774 122 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm14506-201ENSMUST00000121165 536 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm29320-201ENSMUST00000185235 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm29179-202ENSMUST00000186138 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm28598-201ENSMUST00000186490 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm29448-201ENSMUST00000186675 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm29314-201ENSMUST00000186800 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm28253-202ENSMUST00000187971 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm29268-201ENSMUST00000188669 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm29169-201ENSMUST00000189835 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm28978-201ENSMUST00000191120 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm37172-201ENSMUST00000191926 615 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm38076-201ENSMUST00000193889 450 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm38332-201ENSMUST00000194189 147 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm44256-201ENSMUST00000203304 335 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Gm26458-201ENSMUST00000082832 128 ntBASIC3.9□□□□□ -1.78
Cpsf1Q9EPU4 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Cpsf1Q9EPU4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm14142-201ENSMUST00000117833 296 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm13228-201ENSMUST00000118937 634 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm7327-201ENSMUST00000120925 652 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm23585-201ENSMUST00000157656 102 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm24922-201ENSMUST00000158511 102 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm17967-201ENSMUST00000195319 647 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms