Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Cdc40Q9DC48 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm23609-201ENSMUST00000104542 127 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm14825-201ENSMUST00000113538 701 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm13273-201ENSMUST00000119737 159 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm3835-201ENSMUST00000120752 403 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm11896-201ENSMUST00000121105 820 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm14768-201ENSMUST00000122126 678 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm13131-201ENSMUST00000122228 321 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm25860-201ENSMUST00000158252 126 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm23505-201ENSMUST00000158989 130 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm4207-201ENSMUST00000173144 960 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm9541-201ENSMUST00000188409 502 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm28788-201ENSMUST00000189717 375 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm29558-201ENSMUST00000190134 375 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm18403-201ENSMUST00000192907 529 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm34091-201ENSMUST00000200875 604 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm44084-201ENSMUST00000203947 409 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm18644-201ENSMUST00000211458 815 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm18903-201ENSMUST00000215343 480 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm23460-201ENSMUST00000083258 109 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.21□□□□□ -1.9
Cdc40Q9DC48 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Cdc40Q9DC48 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm22019-201ENSMUST00000104359 96 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm9157-201ENSMUST00000117673 225 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm16383-201ENSMUST00000118122 232 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm11913-201ENSMUST00000119094 336 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm5762-201ENSMUST00000119204 258 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm12495-201ENSMUST00000119750 447 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm12998-201ENSMUST00000122445 789 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm23592-201ENSMUST00000157859 117 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm18415-201ENSMUST00000177464 647 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm19244-201ENSMUST00000204340 253 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm44824-201ENSMUST00000207021 229 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 AF357428-201ENSMUST00000083815 69 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cdc40Q9DC48 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm14811-201ENSMUST00000117070 117 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm13122-201ENSMUST00000118380 453 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm14810-201ENSMUST00000121628 486 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm23775-201ENSMUST00000158991 249 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm20542-201ENSMUST00000174582 372 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm27477-201ENSMUST00000184649 143 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm28552-201ENSMUST00000190725 388 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm3933-201ENSMUST00000195391 439 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms