Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Mir5127-201ENSMUST00000175295 71 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm8807-201ENSMUST00000179328 492 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm26988-201ENSMUST00000183296 945 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Mir6917-201ENSMUST00000184111 61 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm25203-202ENSMUST00000200458 216 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm6064-201ENSMUST00000203999 454 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm25203-201ENSMUST00000082842 215 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm23455-201ENSMUST00000083331 100 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ccdc3Q9D6Y1 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.15□□□□□ -1.9
Ccdc3Q9D6Y1 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.15□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ccdc3Q9D6Y1 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm5384-201ENSMUST00000120313 463 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm15142-201ENSMUST00000121013 856 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm13511-201ENSMUST00000121167 363 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm23668-201ENSMUST00000157465 111 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm24734-201ENSMUST00000158860 262 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm3123-201ENSMUST00000163480 480 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Samd15-201ENSMUST00000169669 1194 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm24819-201ENSMUST00000175094 166 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm24019-201ENSMUST00000178620 107 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm26243-201ENSMUST00000179260 107 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm18747-201ENSMUST00000198129 648 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm18193-201ENSMUST00000210017 772 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm19987-201ENSMUST00000216339 499 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm7530-201ENSMUST00000218466 605 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm23296-201ENSMUST00000082555 107 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm24859-201ENSMUST00000082729 107 ntBASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc3Q9D6Y1 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm14647-201ENSMUST00000119392 680 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm15986-201ENSMUST00000122153 400 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm12819-201ENSMUST00000122223 629 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm20672-201ENSMUST00000176605 261 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm27648-201ENSMUST00000184315 107 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm37676-201ENSMUST00000195496 507 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm5552-201ENSMUST00000197149 515 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm29884-201ENSMUST00000218403 453 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm23615-201ENSMUST00000082602 65 ntBASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms