Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm18644-201ENSMUST00000211458 815 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm4052-201ENSMUST00000220890 451 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 AC132881.2-201ENSMUST00000225474 709 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm10212-201ENSMUST00000087884 324 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm44897-201ENSMUST00000206187 1341 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm11843-201ENSMUST00000118984 425 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm12897-201ENSMUST00000120341 250 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm23592-201ENSMUST00000157859 117 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm9613-201ENSMUST00000171662 196 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm44615-201ENSMUST00000206548 358 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm36776-201ENSMUST00000207006 203 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 AC160970.1-201ENSMUST00000219311 475 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm24982-201ENSMUST00000104456 132 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm14599-201ENSMUST00000120469 474 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13080-201ENSMUST00000120556 420 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm14810-201ENSMUST00000121628 486 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm25185-201ENSMUST00000157754 96 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm15946-201ENSMUST00000160654 423 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm25598-201ENSMUST00000179031 107 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm5527-201ENSMUST00000179821 642 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Mir6393-201ENSMUST00000183709 94 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm29452-201ENSMUST00000187996 313 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm28860-201ENSMUST00000188103 313 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm43227-201ENSMUST00000202239 677 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm45071-201ENSMUST00000205353 571 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm9765-201ENSMUST00000043170 321 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm25799-201ENSMUST00000082643 107 ntBASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc39Q9D5Y1 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm14534-201ENSMUST00000120045 357 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13692-201ENSMUST00000120774 371 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm11896-201ENSMUST00000121105 820 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm24666-201ENSMUST00000158937 167 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm28069-201ENSMUST00000189926 214 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm20776-201ENSMUST00000189940 700 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm44954-201ENSMUST00000208513 227 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm8785-201ENSMUST00000220259 487 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 AC134335.1-201ENSMUST00000227626 329 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 AC154692.1-201ENSMUST00000228314 544 ntBASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms