Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm12760-201ENSMUST00000117861 482 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm11813-201ENSMUST00000118586 291 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm14861-201ENSMUST00000119451 455 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm14785-201ENSMUST00000120185 539 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm25667-201ENSMUST00000157701 275 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm17119-201ENSMUST00000163943 280 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm22716-201ENSMUST00000177596 107 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm37878-201ENSMUST00000192108 387 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm37070-201ENSMUST00000193272 460 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 AC157654.1-201ENSMUST00000224130 820 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 AC110380.1-201ENSMUST00000226987 389 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Gm10916-201ENSMUST00000080330 483 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Snord21-201ENSMUST00000082519 94 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Ddx56Q9D0R4 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Mir690-201ENSMUST00000102110 109 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm24544-201ENSMUST00000103862 110 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm23744-201ENSMUST00000104231 149 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm25507-201ENSMUST00000116981 144 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm14537-201ENSMUST00000117464 599 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm16128-201ENSMUST00000117855 626 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm15766-201ENSMUST00000118025 813 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm12571-201ENSMUST00000118132 243 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm15206-201ENSMUST00000119143 454 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm14411-201ENSMUST00000121798 914 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm23513-201ENSMUST00000158181 133 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm31123-201ENSMUST00000192094 666 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm8599-201ENSMUST00000193033 457 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm37601-201ENSMUST00000194922 394 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm44389-201ENSMUST00000203795 182 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm35876-201ENSMUST00000205044 459 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm45081-201ENSMUST00000206281 572 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm45458-201ENSMUST00000209900 522 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm26108-201ENSMUST00000083973 191 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.73□□□□□ -1.65
Ddx56Q9D0R4 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm25509-201ENSMUST00000116985 106 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm12149-201ENSMUST00000117511 654 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm13687-201ENSMUST00000119857 282 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm15168-201ENSMUST00000121057 316 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm23981-201ENSMUST00000157136 106 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Mir7006-201ENSMUST00000183624 69 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm28283-201ENSMUST00000185509 178 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms