Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm14037-201ENSMUST00000120576 313 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm24537-201ENSMUST00000157950 102 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm27755-201ENSMUST00000184623 132 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Mir6899-201ENSMUST00000184798 64 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm38270-201ENSMUST00000192721 407 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm42509-201ENSMUST00000197390 781 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.69□□□□□ -1.82
Ddx28Q9CWT6 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm26002-201ENSMUST00000101915 107 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Snora64-201ENSMUST00000104521 134 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm15659-201ENSMUST00000118881 341 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm14352-201ENSMUST00000119250 449 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm14768-201ENSMUST00000122126 678 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm11281-201ENSMUST00000141391 576 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm25965-201ENSMUST00000157170 93 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm23505-201ENSMUST00000158989 130 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm18417-201ENSMUST00000176564 648 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm27834-201ENSMUST00000183427 125 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm20811-201ENSMUST00000190500 553 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm43096-201ENSMUST00000196173 421 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm42828-201ENSMUST00000199669 469 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm43171-201ENSMUST00000199882 291 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm18691-201ENSMUST00000203593 872 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm4045-201ENSMUST00000204076 310 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm45146-201ENSMUST00000207108 221 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm45658-201ENSMUST00000209197 580 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.68□□□□□ -1.82
Ddx28Q9CWT6 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm25213-201ENSMUST00000102388 113 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm11372-201ENSMUST00000117348 570 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm15916-201ENSMUST00000118355 736 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm14358-201ENSMUST00000118458 403 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm11943-201ENSMUST00000119473 327 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm16445-201ENSMUST00000120399 714 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm5646-201ENSMUST00000120568 714 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm12639-201ENSMUST00000121400 493 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm25177-201ENSMUST00000122634 117 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms