Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm37001-201ENSMUST00000193377 190 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm37239-201ENSMUST00000193510 141 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Mir129b-201ENSMUST00000197461 65 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm44634-201ENSMUST00000206119 152 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm45553-201ENSMUST00000209929 507 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm20948-201ENSMUST00000211091 449 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.01□□□□□ -1.77
Ccdc43Q9CR29 Gm7363-201ENSMUST00000119883 399 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm11830-201ENSMUST00000120175 561 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm11896-201ENSMUST00000121105 820 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm24244-201ENSMUST00000157317 130 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm23505-201ENSMUST00000158989 130 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Mir3104-201ENSMUST00000174911 63 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm24080-201ENSMUST00000175178 232 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Snord92-201ENSMUST00000175548 85 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm7656-201ENSMUST00000182468 1004 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm36934-201ENSMUST00000192007 306 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm43096-201ENSMUST00000196173 421 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm43407-201ENSMUST00000199816 317 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm43228-201ENSMUST00000200735 264 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm31520-201ENSMUST00000203048 733 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ccdc43Q9CR29 AC153361.1-201ENSMUST00000219679 247 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 AC163664.1-201ENSMUST00000226251 1248 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm25205-201ENSMUST00000082841 103 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm25403-201ENSMUST00000082971 143 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm10704-201ENSMUST00000098952 730 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Gm5583-201ENSMUST00000174328 1519 ntBASIC4□□□□□ -1.77
Ccdc43Q9CR29 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc43Q9CR29 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm9001-201ENSMUST00000121642 399 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm20399-201ENSMUST00000174652 132 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm5527-201ENSMUST00000179821 642 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm37617-201ENSMUST00000194309 159 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm9722-201ENSMUST00000194568 802 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm17781-201ENSMUST00000195232 649 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm44274-201ENSMUST00000203417 256 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm45379-201ENSMUST00000211772 549 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm35857-201ENSMUST00000212739 178 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc43Q9CR29 Gm336-201ENSMUST00000186376 1480 ntBASIC3.98□□□□□ -1.77
Ccdc43Q9CR29 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.98□□□□□ -1.77
Ccdc43Q9CR29 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Ccdc43Q9CR29 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc43Q9CR29 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc43Q9CR29 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc43Q9CR29 Gm15061-201ENSMUST00000121076 1046 ntBASIC3.98□□□□□ -1.77
Ccdc43Q9CR29 Gm26276-201ENSMUST00000157099 109 ntBASIC3.98□□□□□ -1.77
Ccdc43Q9CR29 Gm25981-201ENSMUST00000157921 295 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms