Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
Trim11Q99PQ2 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.7□□□□□ -1.5
Trim11Q99PQ2 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm25758-201ENSMUST00000103987 129 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm14125-201ENSMUST00000113442 680 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm24586-201ENSMUST00000116695 89 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm11409-201ENSMUST00000118621 403 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm12704-201ENSMUST00000119789 464 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm22725-201ENSMUST00000158092 110 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Mir5099-201ENSMUST00000175257 74 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm28283-201ENSMUST00000185509 178 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm28263-201ENSMUST00000185884 400 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm3010-201ENSMUST00000198805 448 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm7721-201ENSMUST00000200446 546 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm17989-201ENSMUST00000211543 412 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm35262-201ENSMUST00000215133 267 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm3800-201ENSMUST00000221086 554 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 AC120553.1-201ENSMUST00000227313 260 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm23447-201ENSMUST00000082798 163 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm24706-201ENSMUST00000082806 137 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim11Q99PQ2 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm24230-201ENSMUST00000104313 129 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm11631-201ENSMUST00000119220 156 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm14520-201ENSMUST00000119258 387 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm14129-201ENSMUST00000122436 291 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm25966-201ENSMUST00000157169 117 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm25341-201ENSMUST00000157461 268 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm26354-201ENSMUST00000158221 129 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Ear-ps8-201ENSMUST00000161935 354 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm17148-201ENSMUST00000164702 249 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm20657-201ENSMUST00000177079 515 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm26430-201ENSMUST00000178054 107 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm28781-201ENSMUST00000185760 696 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm29307-201ENSMUST00000187367 696 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm29159-201ENSMUST00000187969 379 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm29339-201ENSMUST00000189613 696 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm28744-201ENSMUST00000189939 340 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm29407-201ENSMUST00000191468 696 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm42694-201ENSMUST00000196951 358 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm44059-201ENSMUST00000204048 351 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm45209-201ENSMUST00000207122 353 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm44776-201ENSMUST00000207212 381 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.68□□□□□ -1.5
Trim11Q99PQ2 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim11Q99PQ2 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms