Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm22600-201ENSMUST00000157598 269 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm25476-201ENSMUST00000175125 185 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm22264-201ENSMUST00000178200 107 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm44408-201ENSMUST00000200205 66 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm26494-201ENSMUST00000083154 143 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm24493-201ENSMUST00000083805 143 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Gm24446-201ENSMUST00000083982 156 ntBASIC2.53□□□□□ -2
Cspg4Q8VHY0 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Cspg4Q8VHY0 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
Cspg4Q8VHY0 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm18387-201ENSMUST00000220333 702 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 AC135119.1-201ENSMUST00000227935 3717 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm16236-201ENSMUST00000159588 379 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm37433-201ENSMUST00000192695 678 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm38283-201ENSMUST00000193041 695 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm37441-201ENSMUST00000194430 678 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm43596-201ENSMUST00000202818 884 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Gm19253-201ENSMUST00000204279 307 ntBASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
Cspg4Q8VHY0 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm15019-201ENSMUST00000120148 434 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 AC166358.4-201ENSMUST00000223030 105 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm42841-201ENSMUST00000199806 1932 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm6982-201ENSMUST00000118752 1560 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm9890-201ENSMUST00000171867 537 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm6649-201ENSMUST00000199743 1165 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 Gm43478-201ENSMUST00000200381 292 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.51□□□□□ -2.01
Cspg4Q8VHY0 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm16355-201ENSMUST00000128606 231 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm28146-201ENSMUST00000185517 701 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm18015-201ENSMUST00000214879 316 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm37703-201ENSMUST00000192292 1784 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm23128-201ENSMUST00000104257 132 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm15399-201ENSMUST00000118055 724 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm16383-201ENSMUST00000118122 232 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm12118-201ENSMUST00000119766 532 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm13121-201ENSMUST00000120637 632 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm22803-201ENSMUST00000158049 283 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm26004-201ENSMUST00000158804 116 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm23289-201ENSMUST00000175615 108 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm26933-201ENSMUST00000182320 827 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm23128-202ENSMUST00000196578 133 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm43427-201ENSMUST00000198188 331 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Gm4052-201ENSMUST00000220890 451 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.5□□□□□ -2.01
Cspg4Q8VHY0 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms