Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm22516-201ENSMUST00000158266 124 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm17194-201ENSMUST00000164610 348 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm21893-201ENSMUST00000179119 397 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm27893-201ENSMUST00000184408 194 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm37417-201ENSMUST00000195257 454 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm43104-201ENSMUST00000197234 311 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm45072-201ENSMUST00000208673 929 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm19987-201ENSMUST00000216339 499 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm3565-201ENSMUST00000222670 609 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 AC158523.2-201ENSMUST00000222708 548 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm22979-201ENSMUST00000082609 159 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Nup35Q8R4R6 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Snord14c-201ENSMUST00000101927 86 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm3940-201ENSMUST00000105087 432 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm11905-201ENSMUST00000117653 678 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm11253-201ENSMUST00000118486 201 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm25555-201ENSMUST00000158078 111 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm25605-201ENSMUST00000158364 124 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm23799-201ENSMUST00000175559 120 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm26866-201ENSMUST00000180414 802 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Gm18116-201ENSMUST00000220920 537 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Ube2nl-201ENSMUST00000085228 456 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Nup35Q8R4R6 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.44□□□□□ -2.02
Nup35Q8R4R6 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm24935-201ENSMUST00000103770 110 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm16171-201ENSMUST00000118004 324 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm15399-201ENSMUST00000118055 724 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm14804-201ENSMUST00000122322 508 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm23167-201ENSMUST00000157155 103 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm25572-201ENSMUST00000157527 172 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Mir7031-201ENSMUST00000183860 65 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Mir6385-201ENSMUST00000184295 105 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm27700-201ENSMUST00000185003 81 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm28390-201ENSMUST00000185212 700 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm37219-201ENSMUST00000192036 926 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm32447-201ENSMUST00000194265 697 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm35931-201ENSMUST00000203931 448 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm19126-201ENSMUST00000207896 509 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm18120-201ENSMUST00000220079 511 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 AC160931.2-201ENSMUST00000221445 351 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 AC125539.1-202ENSMUST00000226449 670 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Snora23-201ENSMUST00000082517 184 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm25147-201ENSMUST00000083030 105 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm24611-201ENSMUST00000083272 107 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Mir101b-201ENSMUST00000083622 97 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Gm25005-201ENSMUST00000083812 156 ntBASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Nup35Q8R4R6 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms