Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm25203-201ENSMUST00000082842 215 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm24533-201ENSMUST00000083138 196 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.12□□□□□ -1.91
Ccdc28aQ8CEI3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm24119-201ENSMUST00000103979 246 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Mir291a-201ENSMUST00000104815 82 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm15038-201ENSMUST00000122144 296 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm23791-201ENSMUST00000122553 293 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm22059-201ENSMUST00000157544 104 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm17091-201ENSMUST00000163248 357 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm20672-201ENSMUST00000176605 261 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Mir5710-201ENSMUST00000176884 69 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm26297-201ENSMUST00000179464 132 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm29104-201ENSMUST00000186304 222 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43104-201ENSMUST00000197234 311 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43308-201ENSMUST00000197236 373 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Mir5121-201ENSMUST00000198528 74 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 AC159246.1-201ENSMUST00000214478 249 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr480-201ENSMUST00000071658 1029 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Snora23-201ENSMUST00000082517 184 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Mir346-201ENSMUST00000083547 98 ntBASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm14877-201ENSMUST00000119803 478 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm14656-201ENSMUST00000120342 502 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm22380-201ENSMUST00000157479 95 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm24008-201ENSMUST00000157733 138 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm18445-201ENSMUST00000195502 774 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm19244-201ENSMUST00000204340 253 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm18557-201ENSMUST00000218710 433 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm18507-201ENSMUST00000218855 525 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm8249-201ENSMUST00000219225 465 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Ccdc28aQ8CEI3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm14448-201ENSMUST00000116383 210 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm14383-201ENSMUST00000121637 386 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm17117-201ENSMUST00000163665 299 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm17194-201ENSMUST00000164610 348 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm27773-201ENSMUST00000184087 78 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm5731-201ENSMUST00000190969 481 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm37428-201ENSMUST00000193886 137 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm43384-201ENSMUST00000200569 637 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm7540-201ENSMUST00000219764 926 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm26226-201ENSMUST00000082509 116 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm8074-201ENSMUST00000095071 252 ntBASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc28aQ8CEI3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ccdc28aQ8CEI3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc28aQ8CEI3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc28aQ8CEI3 Gm25272-201ENSMUST00000104293 128 ntBASIC3.08□□□□□ -1.92
Ccdc28aQ8CEI3 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms