Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26019-201ENSMUST00000104407 119 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm24415-201ENSMUST00000180218 107 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm27640-201ENSMUST00000184580 147 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm44765-201ENSMUST00000206927 601 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm8748-201ENSMUST00000211125 587 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Ear14-201ENSMUST00000049559 468 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Mir202-201ENSMUST00000083568 72 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Usp40Q8BWR4 Gm37903-201ENSMUST00000192122 2381 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm25169-201ENSMUST00000104190 129 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm3940-201ENSMUST00000105087 432 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm14473-201ENSMUST00000122269 557 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm25184-201ENSMUST00000157753 163 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm22135-201ENSMUST00000158752 108 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Mir6345-201ENSMUST00000184286 128 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm28141-201ENSMUST00000186676 342 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm4322-201ENSMUST00000191094 336 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm42805-201ENSMUST00000196158 276 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm45366-201ENSMUST00000209828 384 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm29774-201ENSMUST00000219270 436 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm6171-201ENSMUST00000220760 645 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm23404-201ENSMUST00000082543 97 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm25134-201ENSMUST00000082646 160 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm23975-201ENSMUST00000082685 106 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm22810-201ENSMUST00000082741 158 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.81□□□□□ -1.48
Usp40Q8BWR4 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm7905-201ENSMUST00000119933 1386 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm6221-201ENSMUST00000180064 1386 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.8□□□□□ -1.48
Usp40Q8BWR4 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm11432-201ENSMUST00000117334 231 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm14392-201ENSMUST00000120332 401 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm25781-201ENSMUST00000122527 84 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm23499-201ENSMUST00000157736 268 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm22911-201ENSMUST00000177920 107 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm27694-201ENSMUST00000184740 86 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm37495-201ENSMUST00000194590 264 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms