Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm25419-201ENSMUST00000104215 191 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm14355-201ENSMUST00000117352 264 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm12261-201ENSMUST00000117499 645 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm9043-201ENSMUST00000119677 314 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm12074-201ENSMUST00000120189 219 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm11388-201ENSMUST00000120908 159 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm12936-201ENSMUST00000121439 301 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm14333-201ENSMUST00000130484 264 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm24402-201ENSMUST00000157873 91 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm25433-201ENSMUST00000158283 286 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Mir6416-201ENSMUST00000183664 117 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm28785-201ENSMUST00000187478 379 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm37757-201ENSMUST00000193072 210 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm32447-201ENSMUST00000194265 697 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm9332-201ENSMUST00000198431 730 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm44063-201ENSMUST00000203307 376 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm44011-201ENSMUST00000203336 394 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm9309-201ENSMUST00000223537 546 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm24166-201ENSMUST00000082724 135 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Mir331-201ENSMUST00000083673 96 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm14771-201ENSMUST00000118249 203 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm14359-201ENSMUST00000118883 424 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm23539-201ENSMUST00000157537 224 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm23581-201ENSMUST00000158531 63 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm5777-201ENSMUST00000177265 448 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm23864-201ENSMUST00000177607 107 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm26430-201ENSMUST00000178054 107 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm9320-201ENSMUST00000184151 473 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm42579-201ENSMUST00000200512 734 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm7675-201ENSMUST00000208828 686 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 AC127242.4-201ENSMUST00000221242 470 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm23972-201ENSMUST00000083322 165 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm25126-201ENSMUST00000083343 102 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Rny1-201ENSMUST00000083767 112 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scaf4Q6PFF0 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Gm23744-201ENSMUST00000104231 149 ntBASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Snord72-201ENSMUST00000104549 81 ntBASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Gm11912-201ENSMUST00000117235 264 ntBASIC4.78□□□□□ -1.64
Scaf4Q6PFF0 Gm14647-201ENSMUST00000119392 680 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms