Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.34□□□□□ -1.72
CtcfQ61164 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CtcfQ61164 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CtcfQ61164 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CtcfQ61164 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.33□□□□□ -1.72
CtcfQ61164 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
CtcfQ61164 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CtcfQ61164 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CtcfQ61164 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm13379-201ENSMUST00000118053 621 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm11359-201ENSMUST00000120039 567 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm15387-201ENSMUST00000120421 648 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm11931-201ENSMUST00000121630 447 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm26476-201ENSMUST00000122618 313 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm24730-201ENSMUST00000158228 117 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm17155-201ENSMUST00000165969 473 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm7094-201ENSMUST00000178379 366 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm25412-201ENSMUST00000180258 107 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm27861-201ENSMUST00000183920 214 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm29598-201ENSMUST00000188996 588 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm37164-201ENSMUST00000192809 637 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm17951-201ENSMUST00000198536 496 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm43659-201ENSMUST00000200894 628 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm43232-201ENSMUST00000201346 364 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm42758-201ENSMUST00000202146 283 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm44092-201ENSMUST00000204470 258 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm45006-201ENSMUST00000206078 690 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm45226-201ENSMUST00000206602 288 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm45209-201ENSMUST00000207122 353 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm18462-201ENSMUST00000208112 417 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.33□□□□□ -1.72
CtcfQ61164 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.33□□□□□ -1.72
CtcfQ61164 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 AC126275.1-201ENSMUST00000224881 446 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 AC154506.3-201ENSMUST00000225417 213 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 AC124729.1-202ENSMUST00000225587 938 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CtcfQ61164 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CtcfQ61164 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm25586-201ENSMUST00000082499 112 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Gm5518-201ENSMUST00000084171 648 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.33□□□□□ -1.72
CtcfQ61164 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CtcfQ61164 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CtcfQ61164 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CtcfQ61164 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CtcfQ61164 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.33□□□□□ -1.72
CtcfQ61164 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CtcfQ61164 Snord66-201ENSMUST00000104051 75 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm25848-201ENSMUST00000116790 144 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CtcfQ61164 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm7618-201ENSMUST00000121643 171 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm14473-201ENSMUST00000122269 557 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm22208-201ENSMUST00000122658 110 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm9785-202ENSMUST00000144563 593 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm23753-201ENSMUST00000157575 149 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm17154-201ENSMUST00000165748 431 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm23186-201ENSMUST00000180078 107 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm29299-201ENSMUST00000185609 923 ntBASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcfQ61164 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms