Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Gm22099-201ENSMUST00000157925 123 ntBASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Gm14527-201ENSMUST00000179300 639 ntBASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Gm28594-201ENSMUST00000187022 661 ntBASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Gm28974-201ENSMUST00000187893 231 ntBASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Gm21112-201ENSMUST00000212224 578 ntBASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Gm7760-201ENSMUST00000212265 578 ntBASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 AC131100.2-201ENSMUST00000227701 998 ntBASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc88aQ5SNZ0 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm650-201ENSMUST00000144428 1551 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm25466-201ENSMUST00000103995 132 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm12723-201ENSMUST00000120700 451 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm25642-201ENSMUST00000175137 66 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm20612-201ENSMUST00000176318 236 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm37433-201ENSMUST00000192695 678 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm37441-201ENSMUST00000194430 678 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm43992-201ENSMUST00000204358 197 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm5358-201ENSMUST00000212814 353 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm24446-201ENSMUST00000083982 156 ntBASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc88aQ5SNZ0 Mir291a-201ENSMUST00000104815 82 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm24213-201ENSMUST00000158255 258 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Mir184-201ENSMUST00000083662 69 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm25808-201ENSMUST00000122784 284 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm25669-201ENSMUST00000157699 112 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm6374-201ENSMUST00000159051 788 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm27315-201ENSMUST00000183977 154 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Mir6374-201ENSMUST00000184003 107 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm28628-201ENSMUST00000187006 264 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm28629-201ENSMUST00000187309 263 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm43746-201ENSMUST00000200028 317 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Mir21a-201ENSMUST00000083521 92 ntBASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm24816-201ENSMUST00000175311 151 ntBASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm27468-201ENSMUST00000183577 106 ntBASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm43521-201ENSMUST00000197838 255 ntBASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm43107-201ENSMUST00000198729 255 ntBASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm45252-201ENSMUST00000211579 397 ntBASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc88aQ5SNZ0 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm11387-201ENSMUST00000120266 772 ntBASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm22698-201ENSMUST00000175375 108 ntBASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm36994-201ENSMUST00000192941 492 ntBASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Gm11905-201ENSMUST00000117653 678 ntBASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.43□□□□□ -1.86
Ccdc88aQ5SNZ0 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms