Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm24443-201ENSMUST00000157242 132 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Gm19203-201ENSMUST00000174049 939 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 AC154594.1-201ENSMUST00000225171 1273 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Mir410-201ENSMUST00000083563 81 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Gm38071-201ENSMUST00000195792 3378 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Gm43268-201ENSMUST00000201536 4055 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Gm45038-201ENSMUST00000207537 3838 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Gm11221-201ENSMUST00000117230 597 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Gm20660-201ENSMUST00000177515 289 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Mir9-1-201ENSMUST00000199907 89 ntBASIC4.69□□□□□ -1.66
Ccdc88bQ4QRL3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc88bQ4QRL3 Gm14971-201ENSMUST00000117980 663 ntBASIC4.68□□□□□ -1.66
Ccdc88bQ4QRL3 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.68□□□□□ -1.66
Ccdc88bQ4QRL3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.68□□□□□ -1.66
Ccdc88bQ4QRL3 Gm28871-201ENSMUST00000186191 687 ntBASIC4.68□□□□□ -1.66
Ccdc88bQ4QRL3 Gm28057-201ENSMUST00000186603 615 ntBASIC4.68□□□□□ -1.66
Ccdc88bQ4QRL3 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc88bQ4QRL3 Gm29366-201ENSMUST00000190481 699 ntBASIC4.68□□□□□ -1.66
Ccdc88bQ4QRL3 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm16436-201ENSMUST00000121510 1607 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm12598-201ENSMUST00000117333 830 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm23213-201ENSMUST00000122715 313 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm9587-201ENSMUST00000172449 454 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm43393-201ENSMUST00000200147 194 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm43600-201ENSMUST00000202134 223 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 LOC667541-201ENSMUST00000223408 278 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 AC160984.2-201ENSMUST00000224927 791 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm4017-201ENSMUST00000084813 338 ntBASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Gm15936-201ENSMUST00000118706 460 ntBASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Gm28614-201ENSMUST00000186483 458 ntBASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Gm45240-201ENSMUST00000211437 674 ntBASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ccdc88bQ4QRL3 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm24273-201ENSMUST00000102332 164 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm23128-201ENSMUST00000104257 132 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm26247-201ENSMUST00000116702 91 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm14578-201ENSMUST00000122166 391 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm37293-201ENSMUST00000191658 295 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm23128-202ENSMUST00000196578 133 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm44623-201ENSMUST00000207934 434 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm8274-201ENSMUST00000219820 463 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm7422-201ENSMUST00000220115 640 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm7204-201ENSMUST00000062591 600 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Gm24698-201ENSMUST00000083883 130 ntBASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ccdc88bQ4QRL3 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Ccdc88bQ4QRL3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc88bQ4QRL3 Gm37515-201ENSMUST00000193321 3817 ntBASIC4.65□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ccdc88bQ4QRL3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc88bQ4QRL3 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc88bQ4QRL3 Mir3569-201ENSMUST00000185080 58 ntBASIC4.64□□□□□ -1.67
Ccdc88bQ4QRL3 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc88bQ4QRL3 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.64□□□□□ -1.67
Ccdc88bQ4QRL3 Gm7327-201ENSMUST00000120925 652 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm14821-201ENSMUST00000121975 435 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm25116-201ENSMUST00000157191 122 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm8649-201ENSMUST00000181799 233 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm45452-201ENSMUST00000210905 177 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm25699-201ENSMUST00000082896 167 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms