Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Gm5347-201ENSMUST00000210542 2327 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm23836-201ENSMUST00000104434 129 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm6134-201ENSMUST00000117265 171 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm14267-201ENSMUST00000119751 496 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm11325-201ENSMUST00000119967 469 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm23000-201ENSMUST00000157083 139 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm25824-201ENSMUST00000157092 121 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm22420-201ENSMUST00000178795 126 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm5558-201ENSMUST00000178933 495 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm16378-201ENSMUST00000179168 342 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm28017-201ENSMUST00000183434 126 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Mir7687-201ENSMUST00000184722 59 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm28534-201ENSMUST00000187744 676 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm45777-201ENSMUST00000213009 301 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm18904-201ENSMUST00000218756 329 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm5265-201ENSMUST00000076828 342 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm6065-201ENSMUST00000081336 492 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm23731-201ENSMUST00000083749 107 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc61Q3UJV1 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 n-R5s67-201ENSMUST00000104336 114 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm12568-201ENSMUST00000117362 624 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm13681-201ENSMUST00000117925 210 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm14627-201ENSMUST00000118931 567 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm25291-201ENSMUST00000122795 144 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm22381-201ENSMUST00000158186 107 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm24216-201ENSMUST00000158259 117 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm22769-201ENSMUST00000158367 98 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm27608-201ENSMUST00000184822 162 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm44319-201ENSMUST00000196974 93 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm6543-201ENSMUST00000197353 808 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm43284-201ENSMUST00000200103 253 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm44132-201ENSMUST00000205142 151 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm44539-201ENSMUST00000206010 238 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm19790-201ENSMUST00000214414 251 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm45815-201ENSMUST00000220241 146 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 AC129017.1-201ENSMUST00000228363 270 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Ccdc61Q3UJV1 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Ccdc61Q3UJV1 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc61Q3UJV1 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Ccdc61Q3UJV1 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
Ccdc61Q3UJV1 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Gm11270-201ENSMUST00000117685 471 ntBASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Gm14871-201ENSMUST00000119056 194 ntBASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc61Q3UJV1 Gm23233-201ENSMUST00000157301 137 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms