Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm12722-201ENSMUST00000118507 493 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm13167-201ENSMUST00000118554 578 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm14926-201ENSMUST00000120650 508 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm13471-201ENSMUST00000122057 433 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm23602-201ENSMUST00000157258 132 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm22034-201ENSMUST00000157283 134 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm24008-201ENSMUST00000157733 138 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm24734-201ENSMUST00000158860 262 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm15974-201ENSMUST00000159103 531 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm6486-201ENSMUST00000166202 434 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm2092-201ENSMUST00000178887 639 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm2759-201ENSMUST00000179938 639 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm28141-201ENSMUST00000186676 342 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm38234-201ENSMUST00000195204 421 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm43979-201ENSMUST00000203179 475 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Snora70-201ENSMUST00000083047 137 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trafd1Q3UDK1 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm15382-201ENSMUST00000118011 537 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm11233-201ENSMUST00000122357 634 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Mir1934-201ENSMUST00000158127 83 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm5929-201ENSMUST00000166883 487 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm24969-201ENSMUST00000180331 79 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm18486-201ENSMUST00000184040 298 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28574-201ENSMUST00000185757 699 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28781-201ENSMUST00000185760 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28339-201ENSMUST00000185845 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm29062-201ENSMUST00000186032 694 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm29574-201ENSMUST00000186226 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28828-201ENSMUST00000186601 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28057-201ENSMUST00000186603 615 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28255-201ENSMUST00000187101 694 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm29307-201ENSMUST00000187367 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28397-201ENSMUST00000187970 699 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28896-201ENSMUST00000188609 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm29545-201ENSMUST00000188878 694 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm29339-201ENSMUST00000189613 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm28159-201ENSMUST00000190296 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm29366-201ENSMUST00000190481 699 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm29407-201ENSMUST00000191468 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm37433-201ENSMUST00000192695 678 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm37441-201ENSMUST00000194430 678 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm38107-201ENSMUST00000194873 696 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm44703-201ENSMUST00000205724 248 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm8209-201ENSMUST00000206386 553 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm3565-201ENSMUST00000222670 609 ntBASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trafd1Q3UDK1 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm22115-201ENSMUST00000103976 133 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm23923-201ENSMUST00000104108 133 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Gm24127-201ENSMUST00000104110 130 ntBASIC3.42□□□□□ -1.86
Trafd1Q3UDK1 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms