Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm11372-201ENSMUST00000117348 570 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm9593-201ENSMUST00000166034 469 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm27919-201ENSMUST00000185163 107 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm29413-201ENSMUST00000186019 880 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm29639-201ENSMUST00000188375 580 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm8132-201ENSMUST00000204938 640 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm18644-201ENSMUST00000211458 815 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 AC116465.1-201ENSMUST00000220324 235 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm23447-201ENSMUST00000082798 163 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm7381-201ENSMUST00000098958 300 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.22□□□□□ -1.57
Ddb1Q3U1J4 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ddb1Q3U1J4 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ddb1Q3U1J4 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Ddb1Q3U1J4 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm25848-201ENSMUST00000116790 144 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm7429-201ENSMUST00000118664 348 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm11645-201ENSMUST00000121589 649 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm13602-201ENSMUST00000122405 493 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm25105-201ENSMUST00000122477 130 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm25436-201ENSMUST00000158275 145 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm25535-201ENSMUST00000175364 125 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm17929-201ENSMUST00000186851 627 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm9236-201ENSMUST00000196892 587 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm43431-201ENSMUST00000198577 340 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 AC132465.3-201ENSMUST00000219326 195 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Ddb1Q3U1J4 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm43327-201ENSMUST00000199285 4055 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm11718-201ENSMUST00000119942 537 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm13852-201ENSMUST00000122350 242 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Snord116l12-201ENSMUST00000179816 94 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm23186-201ENSMUST00000180078 107 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm36964-201ENSMUST00000191876 198 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm6240-201ENSMUST00000208014 473 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm44754-201ENSMUST00000208155 400 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 AL603630.1-201ENSMUST00000214781 147 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 Gm19219-201ENSMUST00000215863 724 ntBASIC5.2□□□□□ -1.58
Ddb1Q3U1J4 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms