Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col9a1Q05722 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Col9a1Q05722 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col9a1Q05722 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC5.9□□□□□ -1.46
Col9a1Q05722 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC5.9□□□□□ -1.46
Col9a1Q05722 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm45221-201ENSMUST00000207822 2272 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Col9a1Q05722 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm12191-201ENSMUST00000118307 348 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm11699-201ENSMUST00000119016 401 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm9703-201ENSMUST00000119573 343 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm14008-201ENSMUST00000120483 274 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm13149-201ENSMUST00000122071 339 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm23318-201ENSMUST00000158000 108 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm17187-201ENSMUST00000164622 410 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Mir6391-201ENSMUST00000184391 104 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Ighv1-46-201ENSMUST00000193988 351 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm37601-201ENSMUST00000194922 394 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.9□□□□□ -1.46
Col9a1Q05722 Mir409-201ENSMUST00000198153 79 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm18470-201ENSMUST00000207467 420 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm18464-201ENSMUST00000207803 420 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm18461-201ENSMUST00000208421 420 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm7780-201ENSMUST00000214787 406 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Mir10a-201ENSMUST00000083585 110 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Gm10343-201ENSMUST00000096279 348 ntBASIC5.9□□□□□ -1.46
Col9a1Q05722 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col9a1Q05722 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col9a1Q05722 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
Col9a1Q05722 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col9a1Q05722 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col9a1Q05722 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.9□□□□□ -1.47
Col9a1Q05722 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col9a1Q05722 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col9a1Q05722 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col9a1Q05722 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col9a1Q05722 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Col9a1Q05722 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Col9a1Q05722 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col9a1Q05722 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.9□□□□□ -1.47
Col9a1Q05722 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.9□□□□□ -1.47
Col9a1Q05722 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm37206-201ENSMUST00000195512 3069 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col9a1Q05722 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm11584-201ENSMUST00000120636 325 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm15263-201ENSMUST00000121556 642 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm26098-201ENSMUST00000157247 288 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm26106-201ENSMUST00000157254 228 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm26357-201ENSMUST00000158218 115 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Ighv1-32-201ENSMUST00000195149 351 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm9710-201ENSMUST00000198053 499 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 AC098718.2-201ENSMUST00000226822 285 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Mir449a-201ENSMUST00000083641 91 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 CT025577.1-201ENSMUST00000220862 2846 ntBASIC5.89□□□□□ -1.47
Col9a1Q05722 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC5.89□□□□□ -1.47
Col9a1Q05722 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms