Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CiitaP79621 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CiitaP79621 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CiitaP79621 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CiitaP79621 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CiitaP79621 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CiitaP79621 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CiitaP79621 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CiitaP79621 Gm12755-201ENSMUST00000122297 282 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC4.12□□□□□ -1.75
CiitaP79621 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CiitaP79621 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.12□□□□□ -1.75
CiitaP79621 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CiitaP79621 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.12□□□□□ -1.75
CiitaP79621 Gm27580-201ENSMUST00000183666 149 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.12□□□□□ -1.75
CiitaP79621 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.12□□□□□ -1.75
CiitaP79621 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
CiitaP79621 Gm37343-201ENSMUST00000192542 111 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.12□□□□□ -1.75
CiitaP79621 Gm45379-201ENSMUST00000211772 549 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Gm46103-201ENSMUST00000217614 341 ntBASIC4.12□□□□□ -1.75
CiitaP79621 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Gm4036-201ENSMUST00000220842 626 ntBASIC4.12□□□□□ -1.75
CiitaP79621 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC4.12□□□□□ -1.75
CiitaP79621 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.12□□□□□ -1.75
CiitaP79621 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.12□□□□□ -1.75
CiitaP79621 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.12□□□□□ -1.75
CiitaP79621 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.12□□□□□ -1.75
CiitaP79621 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Gm12582-201ENSMUST00000030555 697 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CiitaP79621 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CiitaP79621 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CiitaP79621 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CiitaP79621 Mir421-201ENSMUST00000083575 76 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CiitaP79621 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CiitaP79621 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CiitaP79621 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CiitaP79621 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.12□□□□□ -1.75
CiitaP79621 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CiitaP79621 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CiitaP79621 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.11□□□□□ -1.75
CiitaP79621 BC051076-202ENSMUST00000199477 2868 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC4.11□□□□□ -1.75
CiitaP79621 Gm14125-201ENSMUST00000113442 680 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm12509-201ENSMUST00000118033 609 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm14731-201ENSMUST00000119216 376 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm11260-201ENSMUST00000121163 942 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm13555-201ENSMUST00000121668 319 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.11□□□□□ -1.75
CiitaP79621 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CiitaP79621 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CiitaP79621 Gm23167-201ENSMUST00000157155 103 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm23753-201ENSMUST00000157575 149 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm24505-201ENSMUST00000157682 126 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm24976-201ENSMUST00000158972 135 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC4.11□□□□□ -1.75
CiitaP79621 Gm20693-201ENSMUST00000177431 211 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
CiitaP79621 Gm26933-201ENSMUST00000182320 827 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Mir8118-201ENSMUST00000183962 129 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm27392-201ENSMUST00000185041 101 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm43096-201ENSMUST00000196173 421 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm42958-201ENSMUST00000197595 318 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm19243-201ENSMUST00000198592 269 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm17893-201ENSMUST00000203017 770 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm18540-201ENSMUST00000204025 526 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CiitaP79621 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CiitaP79621 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CiitaP79621 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CiitaP79621 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CiitaP79621 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
CiitaP79621 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CiitaP79621 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CiitaP79621 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.11□□□□□ -1.75
CiitaP79621 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CiitaP79621 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.11□□□□□ -1.75
CiitaP79621 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CiitaP79621 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CiitaP79621 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CiitaP79621 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.1□□□□□ -1.75
CiitaP79621 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CiitaP79621 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CiitaP79621 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.1□□□□□ -1.75
CiitaP79621 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CiitaP79621 Gm24951-201ENSMUST00000102182 109 ntBASIC4.1□□□□□ -1.75
CiitaP79621 Gm25560-201ENSMUST00000104606 176 ntBASIC4.1□□□□□ -1.75
CiitaP79621 Gm24244-201ENSMUST00000157317 130 ntBASIC4.1□□□□□ -1.75
CiitaP79621 Gm24060-201ENSMUST00000157494 95 ntBASIC4.1□□□□□ -1.75
CiitaP79621 Gm17030-201ENSMUST00000167016 393 ntBASIC4.1□□□□□ -1.75
CiitaP79621 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms