Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.9□□□□□ -1.63
Hmgb1P63158 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb1P63158 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Hmgb1P63158 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.9□□□□□ -1.63
Hmgb1P63158 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb1P63158 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb1P63158 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.9□□□□□ -1.63
Hmgb1P63158 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb1P63158 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb1P63158 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm15058-201ENSMUST00000117689 458 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm12102-201ENSMUST00000118251 604 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm12311-201ENSMUST00000118803 374 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm13717-201ENSMUST00000119868 365 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm6587-201ENSMUST00000120219 613 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm15142-201ENSMUST00000121013 856 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm14253-201ENSMUST00000122112 639 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm25107-201ENSMUST00000122472 129 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm3362-201ENSMUST00000148102 466 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm16285-201ENSMUST00000162999 347 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Mir6541-201ENSMUST00000183649 110 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Mir6911-201ENSMUST00000184241 69 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm37961-201ENSMUST00000192729 299 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm43652-201ENSMUST00000196219 675 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm44387-201ENSMUST00000196298 145 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm17956-201ENSMUST00000199931 838 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm43239-201ENSMUST00000200131 201 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm8158-201ENSMUST00000219220 465 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm8112-201ENSMUST00000219637 465 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.89□□□□□ -1.63
Hmgb1P63158 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm5471-201ENSMUST00000072732 337 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm24921-201ENSMUST00000083024 107 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Hmgb1P63158 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.89□□□□□ -1.63
Hmgb1P63158 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm12719-201ENSMUST00000118859 241 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm12891-201ENSMUST00000119358 240 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm14303-201ENSMUST00000121320 171 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm26424-201ENSMUST00000122530 104 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm22225-201ENSMUST00000157358 278 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm22766-201ENSMUST00000158372 99 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm26173-201ENSMUST00000158416 136 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm15838-201ENSMUST00000161575 180 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm18417-201ENSMUST00000176564 648 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Mir6383-201ENSMUST00000184545 116 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm17775-201ENSMUST00000198542 258 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm43441-201ENSMUST00000201458 205 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm17991-201ENSMUST00000208139 297 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm44543-201ENSMUST00000209136 396 ntBASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Hmgb1P63158 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb1P63158 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb1P63158 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb1P63158 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb1P63158 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hmgb1P63158 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb1P63158 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Hmgb1P63158 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Hmgb1P63158 Gm22020-201ENSMUST00000104358 136 ntBASIC4.87□□□□□ -1.63
Hmgb1P63158 Lipe-203ENSMUST00000105177 1251 ntBASIC4.87□□□□□ -1.63
Hmgb1P63158 Gm14594-201ENSMUST00000118052 537 ntBASIC4.87□□□□□ -1.63
Hmgb1P63158 Gm15659-201ENSMUST00000118881 341 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms